Gene Information

Name : clpE (SGGBAA2069_c05530)
Accession : YP_004287469.1
Strain : Streptococcus gallolyticus ATCC BAA-2069
Genome accession: NC_015215
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit clpE
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 584829 - 587117 bp
Length : 2289 bp
Strand : -
Note : -

DNA sequence :
ATGCTCTGTCAAAATTGTCATTTAAACGAATCAACAATTCATCTTTATACAAATGTCAATGGTCAGCAAAAGCAAATTGA
TTTGTGCCAAAACTGCTATCAAATCATGAAAACTGACCCTAACAATACTATTTTAGGTGGTTTAGGAGATGCACAAGCTT
CTTCCACACAAAATCAATCTACTGGTATGAATCCTTTTGATGATTTCTTCAGTAATTTGAATAATTTCCACGCATTCGGT
GGACAAGATTTCCAAAATACGCCTCCAACACAATCAGGTGGTGGAAATAACGGCGGCAATAATAACAATTATCGTCCAAA
CGGCGCAGCTAACCAACAGCAACAACAAAAAGGTTTGCTAGAAGAATTTGGTATCAACGTTACTGATATTGCTCGTCGCG
GTGACATCGACCCTGTCATTGGACGTGATGCCGAAATCATTCGTGTGATTGAAATTCTTAACCGTCGTACAAAAAATAAT
CCTGTTCTTATTGGTGAACCAGGGGTTGGTAAAACAGCCGTTGTTGAAGGATTAGCTCAAAAAATCGTAGATGGTAACGT
TCCACAAAAACTTCAAAATAAACAGGTTATTCGTCTTGATGTCGTTAGCCTTGTACAAGGAACAGGTATTCGTGGTCAAT
TTGAAGAACGTATGCAAAAACTCATGGAAGAAATCCGTGAACGCAAGGACGTTATTCTCTTCATTGACGAAATTCACGAA
ATTGTCGGTGCTGGTTCTGCAGGCGACGGCAACATGGACGCTGGTAATATTTTAAAACCAGCACTTGCTCGTGGTGAACT
TCAATTAGTTGGTGCTACGACACTCAATGAATACCGCATTATTGAAAAAGATGCAGCGCTTGAACGCCGTATGCAACCTG
TCAAAGTTGATGAACCAAGCGTAGAAGAAACGATTACGATTCTTCGTGGTATTCAAAAGAAATACGAAGATTATCATCAT
GTCAAATACAGCGATGATGCAATTGAGGCTGCCGCAAATCTTTCTAACCGTTACATTCAAGACCGCTTCCTCCCAGATAA
AGCCATTGATTTGCTAGACGAAGCTGGCTCTAAGATGAATTTAACCCTTAACTTTGTTGACCCACAAGAAATCGACAAGC
GTTTAGTGGAAGCTGAAAACCTAAAAACACAAGCTACTCGCGAAGAAGATTATGAACGCGCAGCTTATTTCCGTGACCAA
ATCGCTAAATACAAGGAAATGCAACAACAAACAATCAACGAAGACGATATTCCAGTCATTACTGAAAAGACTATCGAAGC
TATCGTTGAAGAAAAAACTAACATCCCTGTTGGTGATTTGAAAGAAAAGGAACAATCACAATTAATCAATCTCGCTGATG
ATTTGAAAACACACGTCATTGGTCAAGATGATGCCGTTGACAAAATTGCCAAAGCCATTCGTCGTAACCGTGTCGGTCTC
GGTACACCAAATCGTCCAATCGGTTCATTCCTCTTTGTTGGACCAACTGGTGTTGGTAAAACAGAACTTTCTAAACAATT
AGCGATTGAACTTTTCGGCTCAGCTGACAGCATGATTCGTTTCGATATGTCTGAATACATGGAAAAACATGCGGTCGCTA
AACTTGTCGGAGCACCTCCAGGATACGTTGGTTACGAAGAAGCTGGTCAATTGACAGAAAAAGTTCGCCGTAATCCATAC
TCACTCATCCTTCTTGACGAAGTTGAAAAAGCGCATCCTGATGTTATGCATATGTTCTTGCAAGTTCTTGATGACGGTCG
TTTGACTGACGGTCAAGGTCGTACAGTAAGCTTCAAAGATACTATTATTATCATGACTTCTAATGCTGGTACTGGTAAAA
CAGAAGCTTCAGTTGGTTTCGGTGCTGCTCGTGAAGGACGTACAAATTCTGTCCTTGGTGAACTTAGCAACTACTTCAGC
CCTGAATTCATGAACCGTTTCGACGGTATTATCGAATTTAAGGCTCTTAGCAAAGACAATCTTCTCCAAATTGTTAACCT
TATGCTTGACGATGTCAATAAACGTCTAGCAACTAACGATATTCACCTCGAAGTCACTGATAAGGTAAAAGAAAAATTAG
TTGACCTTGGCTACGATCCTAAAATGGGAGCTCGTCCATTACGTCGTACTATCCAAGACCACATTGAAGATGCCATTACA
GACTTCTATCTTGAAAATCCAAGCGAAAAAGATTTGAAAGCTGTTATGACAAGCAATGGTAAAATTATCATCAAATCTGC
TAAAAAAGTTGAAAAAGAAGAAACAACCGTTTCAGCAGAATCAGAATAA

Protein sequence :
MLCQNCHLNESTIHLYTNVNGQQKQIDLCQNCYQIMKTDPNNTILGGLGDAQASSTQNQSTGMNPFDDFFSNLNNFHAFG
GQDFQNTPPTQSGGGNNGGNNNNYRPNGAANQQQQQKGLLEEFGINVTDIARRGDIDPVIGRDAEIIRVIEILNRRTKNN
PVLIGEPGVGKTAVVEGLAQKIVDGNVPQKLQNKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRERKDVILFIDEIHE
IVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILRGIQKKYEDYHH
VKYSDDAIEAAANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPQEIDKRLVEAENLKTQATREEDYERAAYFRDQ
IAKYKEMQQQTINEDDIPVITEKTIEAIVEEKTNIPVGDLKEKEQSQLINLADDLKTHVIGQDDAVDKIAKAIRRNRVGL
GTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPY
SLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKTEASVGFGAAREGRTNSVLGELSNYFS
PEFMNRFDGIIEFKALSKDNLLQIVNLMLDDVNKRLATNDIHLEVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAIT
DFYLENPSEKDLKAVMTSNGKIIIKSAKKVEKEETTVSAESE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-154 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE YP_004287469.1 ATP-dependent Clp protease ATP-binding subunit clpE VFG0080 Protein 0.0 58
clpE YP_004287469.1 ATP-dependent Clp protease ATP-binding subunit clpE VFG0079 Protein 1e-161 55