Gene Information

Name : LAC30SC_04505 (LAC30SC_04505)
Accession : YP_004291998.1
Strain : Lactobacillus acidophilus 30SC
Genome accession: NC_015214
Putative virulence/resistance : Virulence
Product : choloylglycine hydrolase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3049
EC number : -
Position : 916780 - 917757 bp
Length : 978 bp
Strand : -
Note : COG3049 Penicillin V acylase and related amidases

DNA sequence : 
ATGTGTACTTCAATTGTGTTTAGTCCTAAAGATCACTACTTTGGTCGTAATCTTGACCTAGAAATAACTTTCGGTCAGCA
AGTCGTGATTACCCCTCGCAACTATGATTTTAAGTTCCGCAAGATGCCGGAATTAAAACAACATTACGCTATGGTAGGAA
TCGCCCTTAATGCTGGCGGCTATCCTTTATACTTTGATGCTGCTAATGAAAAGGGCTTGGGAATGGCCGGACTAAATTAT
CCTGGCAATGCCACTTACTATGACGTCAAAGATGGCAAAGACAATGTTGCTTCTTTTGAATTCATCCCTTGGATTTTGGG
CCAATGCGCTACAGTAGAAGAAGCTAAGAAATTGCTTGCCAAAATCAACATTGCTGACATCAACTTTAGCGAAAAAATGG
TTGCTTCTAAACTTCACTGGTTAATTGCCGATAAAACCGGCACTTCAATTGTTGTTGAAACTGATAAAGATGGTATGCAT
GTTTACGATAACCCTGTTGGCTGCTTAACTAACAACCCACAATTCCCTAAGCAATTGTTCAACTTAAACAACTACGCAGA
TGTTTCTGCCGCAATGCCAAAGAACAACTTCTCAGATCAAGTTAAAATGGACGGCTACAGCCGCGGCTTAGGTTCACGCA
ATTTGCCAGGTGGTATGGATTCAGAATCTCGTTTTGTCAGAGTAGCCTTCAACAAGTTTAACGCCCCTACTTCCGATTCT
GAAGAAGAAAACGTGGACACTTACTTCCATATTCTGCATTCAGTAGAACAACAAAAAGGCCTGGATCAAGTCGGCCCAGA
TGCTTTTGAGTACACTATTTACTCTGATGGTATCAATTTGGATAAAGGTATCTTCTACTACACTACTTACACTAATAAGC
AAATCAACGTAGTTGATATGAATAAAGAAGATTTAGACAGCAGTGATTTAATTACTTACGATATGCTCACTAAAGGTAAA
TTTAATCATCAAAACTAA

Protein sequence : 
MCTSIVFSPKDHYFGRNLDLEITFGQQVVITPRNYDFKFRKMPELKQHYAMVGIALNAGGYPLYFDAANEKGLGMAGLNY
PGNATYYDVKDGKDNVASFEFIPWILGQCATVEEAKKLLAKINIADINFSEKMVASKLHWLIADKTGTSIVVETDKDGMH
VYDNPVGCLTNNPQFPKQLFNLNNYADVSAAMPKNNFSDQVKMDGYSRGLGSRNLPGGMDSESRFVRVAFNKFNAPTSDS
EEENVDTYFHILHSVEQQKGLDQVGPDAFEYTIYSDGINLDKGIFYYTTYTNKQINVVDMNKEDLDSSDLITYDMLTKGK
FNHQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 3e-91 58
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 2e-91 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAC30SC_04505 YP_004291998.1 choloylglycine hydrolase VFG2162 Protein 2e-93 58