Gene Information

Name : LAC30SC_02690 (LAC30SC_02690)
Accession : YP_004286849.1
Strain : Lactobacillus acidophilus 30SC
Genome accession: NC_015214
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 554334 - 555371 bp
Length : 1038 bp
Strand : +
Note : COG0798 Arsenite efflux pump ACR3 and related permeases

DNA sequence :
ATGAATACGTCAAAAAGCTTATCCTTCATGGATCGCTGCATGACTTTATGGGTGTTTTTAGCTATGGCATTGGGAATCGT
GATCAGTTTTGTTTTTCCATCATTTCCTAGACTAATTAATGGTTGGTCGGTAGGAACAACTTCGATACCGATCGCAATTG
GTTTGATTTTGATGTTGTATCCACCTTTGACTAAGGTTAATTACGACAAAATGGGGGATGTCTTTAGAGATAAGAAAGAG
CTTGCTTTTTCTTTAATTCAAAACTGGATTGTTGGTCCGTTATTGATGTTTGCATTAGCGATTATTTTTCTTCATAATTA
TCCTAATTATATGGTTGGCTTGATCATGATCGGACTTGCACGATGCATTGCCATGGTAATTGTGTGGAATGAGTTAGCAC
AAGGGAATAACGACTATGCTGCTGGCTTAGTTGCTTTAAATTCTATTTTCCAAATTATTTTTTATTCTGTTTATGCGTAC
TTTTTTATCAGTGTATTGCCTAAGTTCTTTGGAATTCAAACTAAAACCCTTAACATTACGATGGGTGAAATTGCTAAAAC
TGTCTTTATTTACTTGGGTATTCCGTTTATCCTAGGAATAGGATCTAGATATCTTATTATTAAGTCTAAAGGTAAAGATT
GGTTTGAATATAAGTATGTTCCTAAAATTAGCAGAATAACAACATGGGCATTGCTTTTCACCATTGTATTAATGTTTTCT
GTTAAAGGAGTTAAGGTTGTACAGTTGCCACTTGATGCCGTTAGAGTAGCTGTTCCTTTGTTACTTTACTTTGTATTGAT
GTTCTTTATTACTTTTTGGATTGCTAAAAAGACTCATACTAGCTATCCAATTTCTGCAACACAAGCATTTACTGCTTCAA
GTAACAACTTTGAACTTGCAGTTGCAGTAACTGTTGGTATCTTTGGCTTAAACTCCGGTGAAGCATTTGCTGCAGTAGTT
GGACCTATGGTAGAAGTACCAGTTATGATTTTGCTAGTAGATGTAGCATTGTGGATTAAGAGGAGATACTACAAATAA

Protein sequence :
MNTSKSLSFMDRCMTLWVFLAMALGIVISFVFPSFPRLINGWSVGTTSIPIAIGLILMLYPPLTKVNYDKMGDVFRDKKE
LAFSLIQNWIVGPLLMFALAIIFLHNYPNYMVGLIMIGLARCIAMVIVWNELAQGNNDYAAGLVALNSIFQIIFYSVYAY
FFISVLPKFFGIQTKTLNITMGEIAKTVFIYLGIPFILGIGSRYLIIKSKGKDWFEYKYVPKISRITTWALLFTIVLMFS
VKGVKVVQLPLDAVRVAVPLLLYFVLMFFITFWIAKKTHTSYPISATQAFTASSNNFELAVAVTVGIFGLNSGEAFAAVV
GPMVEVPVMILLVDVALWIKRRYYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 2e-96 56
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 2e-96 56
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 2e-76 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAC30SC_02690 YP_004286849.1 hypothetical protein BAC0573 Protein 5e-110 64
LAC30SC_02690 YP_004286849.1 hypothetical protein BAC0004 Protein 4e-79 50