Gene Information

Name : LAC30SC_02060 (LAC30SC_02060)
Accession : YP_004286734.1
Strain : Lactobacillus acidophilus 30SC
Genome accession: NC_015214
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 406459 - 407331 bp
Length : 873 bp
Strand : +
Note : COG0582 Integrase

DNA sequence : 
TTGGTAAATGTAAAGCAATTCCTTAAGAACCATATCTTAAAAGATTTAGGTAGCTACTATATCGAACGACTAACGCCTTT
TAAATGTCAGAGGGTCGCTCAAAAGTGGGCGCTTGAATTGCCAAAAACATTTAATACATTGATAATTTATTCCAATAAGC
TGTTAGATTATGCGGTGCGGTTCGATTACATTCGAAAAAATCCAATGATAATCAAGCCTAAAAAGCAAGCGGAACACAAG
GAGTTCACCGACTTTTATACCAAACAGGAACTAAACGCTTTTTTAAAAGCATCTAAAAATGAGAATATTAAGATATATAC
ATTCTTTCGCTTGCTTGCCTATAGTGGAATGCGCAAAGGTGAAGCATTAGCGCTTAAATGGTCAGATATTGATTTTACTA
GTAATACTATTAGCATTAACAAAACGGTTTCTATTGGTAACAAGCATAGAGTAGTGGTCAACAATACTACGAAAACCAAA
AGAAACAGAGCAATTTCTATGGATGCTAGAACGATGCAATTATTAAAAGAGTGGCGTTTTCAGCAAAGACGGTACTTGCT
ACAGCTAGGCTTTAATCCTTTTGATAAAGAGCAAGTAGTATTTCAAAACTTCGACAATGAGGTTGTGCGTCCAAATCTTG
TAGCGGTGTGGAATAAAAGAATCTGCGATAAGAACGGGCTAAGACGTATCAAAACACACGGTTTTAGGCATACTCACGCT
TCTTTATTGTTTGATGCGGGTGTTCCTATGGAAGACGTAAAACAACGGCTAGGACATGCAAGCATTCAAACTACAATGGA
CATATACACTCACGTTACTAAGGAGAAACAAGATAAAACGGCTCTAAGTTTTGCTCAATACATGGAAAATTAG

Protein sequence : 
MVNVKQFLKNHILKDLGSYYIERLTPFKCQRVAQKWALELPKTFNTLIIYSNKLLDYAVRFDYIRKNPMIIKPKKQAEHK
EFTDFYTKQELNAFLKASKNENIKIYTFFRLLAYSGMRKGEALALKWSDIDFTSNTISINKTVSIGNKHRVVVNNTTKTK
RNRAISMDARTMQLLKEWRFQQRRYLLQLGFNPFDKEQVVFQNFDNEVVRPNLVAVWNKRICDKNGLRRIKTHGFRHTHA
SLLFDAGVPMEDVKQRLGHASIQTTMDIYTHVTKEKQDKTALSFAQYMEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAPIG0469 YP_005733279.1 integrase Not tested SAPI-S0385 Protein 2e-46 42
SAOV_0414c YP_005735930.1 integrase Not tested SaPI1 Protein 9e-47 42
SAB0342c YP_415844.1 integrase Not tested SaPIbov Protein 9e-47 42
unnamed AAG29618.1 integrase-like protein Not tested SaPIbov Protein 7e-47 42