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Name : LAC30SC_01770 (LAC30SC_01770) Accession : YP_004286682.1 Strain : Lactobacillus acidophilus 30SC Genome accession: NC_015214 Putative virulence/resistance : Unknown Product : transcription termination/antitermination factor NusG Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 353131 - 353688 bp Length : 558 bp Strand : + Note : COG0250 Transcription antiterminator DNA sequence : ATGGTCGAAACAGCTCAAAAGAAATGGTATGTATTGCATACTTATTCTGGTTATGAAGACAAAGTTAAGTCAGACTTGCT TTCACGTGCACAAAGCATGGGGATGCAAGACTACATCTTCCGTGTAATGGTTCCAGAAGAAGAAAAAGTGGAAACTGTTC GCGGCAAGAAGCAAGAAGTTGAAGAAAAGATTTTCCCAGGTTACGTTTTAGTAGAAATGGTAATGACTGACGAAAGTTGG TTTATCGTAAGAAACACACCAAACGTAACTGGATTTGTCGGTTCACACGGTGGTGGTTCAAAGCCTTCACCACTTCTTCC AGAAGAAGTTGAACGTTTGCTTAAGAACCAAGGCCAACCTGCTAAGGAACCAACTGCTAACTTCGATATTGGCGAATCAG TAACTATTACTGAAGGTGCCTTCAACGGTATGGTTGGTAAGATCACTGACATTCAACCTGATAAGTACAAATTATATGTT TCAGTTGATATGTTTGGTCGTGCAACTACTGCTGAACTTGACTACGATCAAGTTAAGAAGTTGGGCGAAAACGAATAA Protein sequence : MVETAQKKWYVLHTYSGYEDKVKSDLLSRAQSMGMQDYIFRVMVPEEEKVETVRGKKQEVEEKIFPGYVLVEMVMTDESW FIVRNTPNVTGFVGSHGGGSKPSPLLPEEVERLLKNQGQPAKEPTANFDIGESVTITEGAFNGMVGKITDIQPDKYKLYV SVDMFGRATTAELDYDQVKKLGENE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 4e-42 | 52 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 3e-40 | 51 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 9e-32 | 41 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 9e-32 | 41 |
