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Name : LAC30SC_10320 (LAC30SC_10320) Accession : YP_004293096.1 Strain : Lactobacillus acidophilus 30SC Genome accession: NC_015214 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1996654 - 1998783 bp Length : 2130 bp Strand : - Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGGCATACTTTGACAATGATTTTGACAACTTATTTAACGAATTGAACAGCTCATTCTTTAATGACGACTTCGGCAAGAG AAGTGGCAATGGAAATGGCAACTCAGGTTCAATTCCAATTAACTACTCAAGCAACATGGGAGCAACCCCACAAACTATTC AACAAAATCCTCAAAATCCAAATGAAAAACCAATTGGTGAAGATTTAGTTGAAGAAGCAAAGAACAACAAATTCGACCCA GTTATCGGTCGTGATGAACAAATCGATAACGTAATCGAAATTTTATCAAGACGTAAGAAGAACAATCCAGTTTTAATTGG ACCTGCTGGTGTTGGTAAAACCTCTATCGTAGAAGGCTTGGCTGAAAGAATTGCTTCTGGCAACGTTCCAGCTAAGATGG CAAACATGCACATTATTTCAGTAAATATTAACGACATGGTTGCTGGTTCAAGCCTTCGTGGTAGCTTTGAAGAGAGACTT AAGAAAGTTATCGACAAAGCTAAGAGTGATCCTAACATTGTTTTATTCATCGACGAATTACACAACATTGTAGGTGCAGG TTCTACTGATTCAGAAAACAACAACGGTGACGCTGCTAACATCTTGAAGCCAGCTCTTGCAAGCGGTGACTTGAAGTTAA TCGGTGCTACTACTACAAGCGAATTCCAAAGAATTGAAAAAGACCCAGCATTATCACGTAGATTCCAAGCTGTACAAGTT CCAGAACCTACTACTGATGTAGCTGTTAAGATTCTGGAAGGCTTGAAGAAGAAATACGAGGACTACCACCACGTAAAATA CACTGACGACAGCCTTAAATTAGCCGTTGAATTATCAGAAAGATACATTCAAGGTCGTTACTTACCAGACAAGGCCATCG ACTTGATGGATGAAGCTGGTGCTAAGAAGGCTTTGCTTGTACAACCAACTGATGAAAAGAGCTTGAAGAATCAAATCAAT GCTCTTGAAGCTAAGAAGTCAGAAGCTGCTAAGGCTGAAGACTACGACAAGGCTTCAGAAATTAAGAACAAGATTGCTGA CCTTGAAAAGCAACTTAAGAACGTAGACACTAAGAATACTCCAGAAGTAACTGAGAAAGACATCTACGAAATTATTGAGC AAAAGACTAAAATTCCTATGAGCGAACTCCACGCTGACGAAGCTCAAAAGAACTTAGACCTTGCTAAGAAGTTAAAGCAA AACGTTATTGACCAAGACAGAGCAATTGATGTAATTACTGACGCTATTGCTCGTAAGCAAATCTTTAAAGACAGCGATCG TCCTACTGGTTCATTCTTACTTACTGGTCCTACTGGTGTTGGTAAGACTGAACTTGCTAAGCAATTAGCTATCCAATTAT TTGGTAACAAAGACCACTTAATCCGTTTGGACATGAGTGAATACCAAGACGAGATGGCTGTTAACAAGTTAATCGGTTCA GCTCCTGGTTACGTTGGCTACGGTGAAGGTGGTCAATTAACTGAAAAAGTTCGTCACCAACCATACTCATTGATTTTGTT CGATGAAATTGAAAAGGCTAACCCACAAGTCTTCAACGCACTTCTCCAAATTATGGATGATGGTCGTTTGACTGACGCAC AAGGCAGAACCGTTTCATTCAAAGACACTATCTTGATTATGACTTCAAACGCAGGCTTCTCAGACAAGCTTCTTGAAGAC GGCAAGGTTGACCAAGACAAGTTAATCTCAGCTCTTGAAAACTACTTCAGACCTGAATTCTTGAACCGTTTGGACGCAAT CGTTCCATTCAACTCACTTACTGAACAAGACATGGGCAAGATCATCAACATTTACTTGAAGAAGATGTCCCACGTACTTG CTAAGAAGGGTGTAACTGTTGAAGTTTCAGACGAAGCTAAGGCATTCTTGGCAGAAAAGGGTTACGACAAGAAGTTCGGT GCTCGTCCACTTAGAAGAGTTGTTGAACAAAACCTTGAAACTCCAGCTGCTAAGTTGATCTTAAGAGAACCTGACACTAA GAAGGTTGAATTTACTGCTGACGACAAGCACTTGTACTTGAACGGCAAAGCAATCTTCGACATTTCTCCAAAGATTGAAG AAAAGGTTAAGGAAGACGAAGCTAAGGCTGACGACAAGAAAGAAGACTAA Protein sequence : MAYFDNDFDNLFNELNSSFFNDDFGKRSGNGNGNSGSIPINYSSNMGATPQTIQQNPQNPNEKPIGEDLVEEAKNNKFDP VIGRDEQIDNVIEILSRRKKNNPVLIGPAGVGKTSIVEGLAERIASGNVPAKMANMHIISVNINDMVAGSSLRGSFEERL KKVIDKAKSDPNIVLFIDELHNIVGAGSTDSENNNGDAANILKPALASGDLKLIGATTTSEFQRIEKDPALSRRFQAVQV PEPTTDVAVKILEGLKKKYEDYHHVKYTDDSLKLAVELSERYIQGRYLPDKAIDLMDEAGAKKALLVQPTDEKSLKNQIN ALEAKKSEAAKAEDYDKASEIKNKIADLEKQLKNVDTKNTPEVTEKDIYEIIEQKTKIPMSELHADEAQKNLDLAKKLKQ NVIDQDRAIDVITDAIARKQIFKDSDRPTGSFLLTGPTGVGKTELAKQLAIQLFGNKDHLIRLDMSEYQDEMAVNKLIGS APGYVGYGEGGQLTEKVRHQPYSLILFDEIEKANPQVFNALLQIMDDGRLTDAQGRTVSFKDTILIMTSNAGFSDKLLED GKVDQDKLISALENYFRPEFLNRLDAIVPFNSLTEQDMGKIINIYLKKMSHVLAKKGVTVEVSDEAKAFLAEKGYDKKFG ARPLRRVVEQNLETPAAKLILREPDTKKVEFTADDKHLYLNGKAIFDISPKIEEKVKEDEAKADDKKED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-133 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LAC30SC_10320 | YP_004293096.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0080 | Protein | 2e-149 | 51 |
| LAC30SC_10320 | YP_004293096.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0079 | Protein | 4e-133 | 45 |
