Gene Information

Name : LAC30SC_10175 (LAC30SC_10175)
Accession : YP_004293067.1
Strain : Lactobacillus acidophilus 30SC
Genome accession: NC_015214
Putative virulence/resistance : Unknown
Product : neopullulanase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 1964108 - 1965829 bp
Length : 1722 bp
Strand : -
Note : COG0366 Glycosidases

DNA sequence :
ATGCAATTAGCTGCTTTAAAGCACCGAAGTGAGAGTGAAGATAGTTTTGTAATTGATCCTAAGCACGTTCGCGTTCGTTT
TCATAGTGCAAAGGGCGATGTTGAAAAGGTAATTGTTCACTACTGCGATAACTATTTGCCACTGAAATACGCAAAAACGA
TTGAAATGGATAAAATCGGCGAAGGACAAGTAGAAGATCACTGGGGTGCTACGCTTGAAGCACCATTTCACCGTTTAAAG
TACACCTTCGAAGTTATTGGTAAAGATGGTACCAGCGTAGTTTACGGTGATCGTGCTATCAGCAGCGACATCGAAGCCGC
AGTTAATAAAGACGGATCATACTTTAAGATTCCATATTGTCATGAAATCGATATGGTTAAAACACCTGAATGGGTTAAGC
ATACCGTTTGGTATCAAATCTTCCCTGAACGTTTTGCTAACGGCGACAAGTCTAACGACCCAAAGAATGTAAAGCCATGG
AACCCATCCGATCATCCTGGCCGTGAAGACTACTACGGCGGTGACTTACAAGGTGTGCTTGACCACTTAGACTACCTTAA
GAAGTTGGGCGTTAACGGCTTGTACTTCTGTCCTATTTTTAAGGCTGGTTCAAACCACAAGTACGACACAATCGACTACT
TACAAGTTGACCCAGAATTCGGTGATAAAGATTTGTTTGCCAAGGTGGTTAATGAAGCTCACGCTCGCGGCATGAAGGTT
ATGCTTGACGCGGTATTCAACCACTTGGGTGACAAGTCAATGCAATGGCAAGATGTAGTCAAGAATGGCCCAAGTTCACG
TTTTGCTAACTGGTTCCACATTAATAAGTATCCAGTTGAACCATATCATGACCCATTGAAGGGTGAAGGCGACCCACAAT
TTGATACCTTTGCTTTTGAAAAGCACATGCCAAAATTGAACACTGCTAATCCAGAAGTGCAAGATTTCTTGCTTGAAATC
GCAACCTACTGGGTAAAATACTTTGATATTGATGCATGGCGCCTTGATGTGGCTAACGAAGTAGACCACCACTTCTGGAA
GAAATTCCACAAGGCAGTTACCGACATTAAGCCAGACTTCTATGTTGTAGGTGAAATTTGGCACTCAGCACGTCCATGGC
TTAACGGCGATGAATTCACTGGCGTTATGAACTACCCTTACACTTTGCAGATCGAAGATCACTTCTTTAAGAACAAGTTG
ACTGCTACGCAATTGACTAGAAGATTGACCGACCAATTGATGAAGTACAGGGATGAAACCAATGCCGGCATGATGAACAT
GCTTGATTCGCACGACACAGCCAGAATTTTAACTGTGGCTAATGGTGATCAAGACTTGGCATTACAAGCTCTTGCTTTTG
AATTTATGCAAAAGGGTAGTCCATGTATTTACTACGGTACTGAAATGGGCATGTCCGGCGGCAACGATCCAGATTGTCGT
AAGCCAATGGACTGGTCAAAAGAAGATGGCCCAGTATGGCAAAGAGTTCACAGCTTGATTGAATTCCGTTTAAAGCATGA
TGAAACCTTTGGTAAAGGCCAAATTAAGTTATACGTAACAGAAGATGGCTTAATTGAAGTCGATCGAGCAGGCAAAGAAC
AGATTCATGCCTACTTTAATACCACAAAAAAGAATGTAAAAATTTCTTGTGAAAATGCATTTAGTCAAAATTATGAAAAT
GGCGAATTAGCTCCAAAGGGCTTTGTAGTCGAGGTTCGTTAA

Protein sequence :
MQLAALKHRSESEDSFVIDPKHVRVRFHSAKGDVEKVIVHYCDNYLPLKYAKTIEMDKIGEGQVEDHWGATLEAPFHRLK
YTFEVIGKDGTSVVYGDRAISSDIEAAVNKDGSYFKIPYCHEIDMVKTPEWVKHTVWYQIFPERFANGDKSNDPKNVKPW
NPSDHPGREDYYGGDLQGVLDHLDYLKKLGVNGLYFCPIFKAGSNHKYDTIDYLQVDPEFGDKDLFAKVVNEAHARGMKV
MLDAVFNHLGDKSMQWQDVVKNGPSSRFANWFHINKYPVEPYHDPLKGEGDPQFDTFAFEKHMPKLNTANPEVQDFLLEI
ATYWVKYFDIDAWRLDVANEVDHHFWKKFHKAVTDIKPDFYVVGEIWHSARPWLNGDEFTGVMNYPYTLQIEDHFFKNKL
TATQLTRRLTDQLMKYRDETNAGMMNMLDSHDTARILTVANGDQDLALQALAFEFMQKGSPCIYYGTEMGMSGGNDPDCR
KPMDWSKEDGPVWQRVHSLIEFRLKHDETFGKGQIKLYVTEDGLIEVDRAGKEQIHAYFNTTKKNVKISCENAFSQNYEN
GELAPKGFVVEVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09660 YP_002510949.1 alpha-amylase Not tested PPI-1 Protein 8e-130 47