Gene Information

Name : LAC30SC_09385 (LAC30SC_09385)
Accession : YP_004292915.1
Strain : Lactobacillus acidophilus 30SC
Genome accession: NC_015214
Putative virulence/resistance : Virulence
Product : exopolysaccharide biosynthesis protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 1826548 - 1827330 bp
Length : 783 bp
Strand : -
Note : COG0489 ATPases involved in chromosome partitioning

DNA sequence : 
ATGCCATTATTTAAGAAAAAGCGCGGTACAGATGATACCATTAAAAATGGTGCTAAATTAATCACTGTAGCTAAGCCAAA
GAGTCCAATAGCTGAACAATTCCGTACTGTTCGTACTAATATTAACTTTATGGCAGTGGATCATGACATTAAGTCTTTAG
CATTTACTTCTGCTAATATTAGTGAAGGTAAGTCTACTGTAGCTGCTAACGTTGCTGTTACTTATGCTCAAGCTGGACGT
AAAGTTTTGTTAGTCGATGCCGATTTACGTAGACCTACAGTGCATTCAACCTTTAACTTAAGTAATCATGTTGGTCTTAG
TACAGTTATCTCTTCTACTGCTAAGGAAGTTGATCTTGATAGTGTAGTACAAGAGAGTGGCGTAGATAATCTTTACGTGT
TAACAGCTGGTCCGATGCCACCTAACCCAGCAGAACTGATTGGTTCTAAGCGTATGCGTGACTTTGTTAAACTTACCGAA
GAACGCTACGATTTGGTTATTATCGACTTGGCTCCTGTTCTTGAAGTATCTGATACACAAGAACTTGCTAGTCACTTAGA
TGGGGTTGTCTTAGTAGTTCGCCAAGGTAAGACGCAAAAGATGGCCATTAAGCGTGCTGTTGAAATGCTTGAATTTGCAA
AGGCACGTATCTTGGGTTACATCATGAATGATGTAAGTTCTGATAATGCTGGTTATGGCTATGGTTACGGATACGGCTAT
GGTTATGGCTACGGAGAAGAAGATACAAAGAAAAAAGGATTGTTCTCTAAATTTAGGAAGTAA

Protein sequence : 
MPLFKKKRGTDDTIKNGAKLITVAKPKSPIAEQFRTVRTNINFMAVDHDIKSLAFTSANISEGKSTVAANVAVTYAQAGR
KVLLVDADLRRPTVHSTFNLSNHVGLSTVISSTAKEVDLDSVVQESGVDNLYVLTAGPMPPNPAELIGSKRMRDFVKLTE
ERYDLVIIDLAPVLEVSDTQELASHLDGVVLVVRQGKTQKMAIKRAVEMLEFAKARILGYIMNDVSSDNAGYGYGYGYGY
GYGYGEEDTKKKGLFSKFRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 4e-33 44
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 8e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAC30SC_09385 YP_004292915.1 exopolysaccharide biosynthesis protein VFG1298 Protein 1e-35 41