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Name : LAC30SC_09255 (LAC30SC_09255) Accession : YP_004292889.1 Strain : Lactobacillus acidophilus 30SC Genome accession: NC_015214 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3666 EC number : - Position : 1805273 - 1807003 bp Length : 1731 bp Strand : + Note : COG3666 Transposase and inactivated derivatives DNA sequence : ATGTATCAAAATTATATCACAGGACAAACTACTTTATCATTAAATTTAGATTTTTCTATCCCTGTAAATCACATTGCCAG TGTTATCAGTGAATTCGTTGATTCTATTCCTAACGAAGTTATCTTAGAAACCACTTCTGATACTGGTCGGCCAGCATATC ACCCAGCAATGATGCTTAAGATCTTGCTCTTTGCCTATTCCAGAAGAGTCTTTTCAGGCAGAAAAATTGAAAGAATGCTA GAAGAGAATCTGCCCATGATGATTTTGGCTGACAATAGAAAGATTTCTTATCACACGATCAATAATTTCAGATCAAGCGA CCATGCCAATAAGGTAATTAAGCAGTGCTTTGTCTACTTTACTTCATTATTAGAAGATGAGGGATTAATCCGTGAAAATG CAGTTTTTATCGATGGTACTAAGATTGAAGCGGACGCCAACAGGTACACTTTTGTCTGGCGAAAAGCTATTGAGAAGTAT CATGCCAAGTTAAAGGAAGACGTGTCTGCTTTATATGAAGAACTGATCAATAAAGAAGTAGTCAAAGCCATGGCCGAAGA AGAAGCCCAAACTAGTCAAGGCTTAGAGATTCTGGCTCAAGAAACGGAAAAAGAAGTTGAGAAGCTGACCGAGAAAATTG ATCGAGAACCTAAAGCCATTCCAGGCGGATCAAAAAATAAGGCCAAGCGCCGTGAATTAAAGAAGATCGCACATAAACTC AGAAAAGATTTTATTCCGCGTGCTAAAAAGTACGAAGAAGCTGAAGAGATCTTTGCTGGCCGTAACAGCTACTCTAAAAC AGATCATGATGCCACCTTCATGCATATGAAAGAAGATCATATGAAAAACGGGCAGCTAAAGCCAGGCTACAATATTCAGG CAGCGACTACTAATCAATATATAGTTGATTTTGCCCCGTTTCCTAATCCGACTGACTTTAGAACATTCGAACCATTTCTA GACCAAATGAAGTCCAGAGGAATTCTCGATAAGTTTCAAAATATTGTGGCCGATGCGGGCTATGGCAGTGAATACAATTA CTCGATTCTGGAAGAGAATTATTCAGATAAGAACTATCAGATTCCGTATACCCAATACGAAAAAGAACAAACGCGAAAAT ATAAGAAAGATCCATCAAAGGTCGACAACTGGTACTATAACGAAGAAGAAGACTATTACGTAGATAAATCAGGCGTCCGC TTCAACTTCAAATATTATAGTCAAAGAAAAGATCGATCTACTGGCATGGTCAGAAACTTCAAAATTTATGAAGCTGATGA GTTCCAGCTAACTGAAGAACTGACCCAATTGGCTAAAACCAAAACAGGTCGACAAAGACAGATTCACTACAATCCTAACT GGCAGTATTTAAAAGAAAAAGCAAAAGAGACTCTTCAAAGCGAAGAAGGCAAACGCATCTATGGCTGTCGCAAGCCAGAT GTGGAGCCAATTTTTGGGCACATGAAGAGTGTATTTGGTATGCGCAGAACGCATTTAAGAGGCAAAAAGAAAGTCGAAAC GGATGTCGGTATCATGTTCATGACGATGAATCTGAAAAAATATGGAGCCAACAAGAAGGTAAAGCCTTCAAATTTTCATT TCAAAAACAAAAAACACAGGAATTCACTAAAAATAATGAATTGCTGTGTTTTTATATCCGGGCTAAAAATCGAGTTTTTT CCCAGACACTTTTTGATGCGCAAAAACTTACTAAGAAGTCTTTGTTTTTAA Protein sequence : MYQNYITGQTTLSLNLDFSIPVNHIASVISEFVDSIPNEVILETTSDTGRPAYHPAMMLKILLFAYSRRVFSGRKIERML EENLPMMILADNRKISYHTINNFRSSDHANKVIKQCFVYFTSLLEDEGLIRENAVFIDGTKIEADANRYTFVWRKAIEKY HAKLKEDVSALYEELINKEVVKAMAEEEAQTSQGLEILAQETEKEVEKLTEKIDREPKAIPGGSKNKAKRRELKKIAHKL RKDFIPRAKKYEEAEEIFAGRNSYSKTDHDATFMHMKEDHMKNGQLKPGYNIQAATTNQYIVDFAPFPNPTDFRTFEPFL DQMKSRGILDKFQNIVADAGYGSEYNYSILEENYSDKNYQIPYTQYEKEQTRKYKKDPSKVDNWYYNEEEDYYVDKSGVR FNFKYYSQRKDRSTGMVRNFKIYEADEFQLTEELTQLAKTKTGRQRQIHYNPNWQYLKEKAKETLQSEEGKRIYGCRKPD VEPIFGHMKSVFGMRRTHLRGKKKVETDVGIMFMTMNLKKYGANKKVKPSNFHFKNKKHRNSLKIMNCCVFISGLKIEFF PRHFLMRKNLLRSLCF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 1e-63 | 42 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 7e-68 | 42 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 7e-68 | 42 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 7e-68 | 42 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 5e-68 | 42 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 3e-65 | 42 |
