|
Name : LAC30SC_09155 (LAC30SC_09155) Accession : YP_004292869.1 Strain : Lactobacillus acidophilus 30SC Genome accession: NC_015214 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 1782612 - 1783661 bp Length : 1050 bp Strand : - Note : COG2826 Transposase and inactivated derivatives, IS30 family DNA sequence : ATGGACTCACTACATTCTATCATGGACAAGCGTAAAAAAGGAACACATCTATCGCTTGAAGAGCGGGTTATTATTCAAAC TCGTTTGAAAGATCATTGTTCTTTGCGTTCCATCGCTCGAGAAATTGGCTGTTCCCCTAGTACAATTCACTATGAGATCA AACGAGGGGCTGTTAAGCTGTATCACGGTAAAGTTAAACGTTATAAAGCCCAACAAGGTCAGAGTGTTTATCAAAACAAT CGTCGATACTGTGGACGCAAATCGGATTTTCTTAAGAAGCATAAGTTTATTGATTACGTCCAACAGCACTTTTTTGAAGA TGGCTGGTCGCTCGACGCCTGCAGTAATCGCTGCACTGCTGTAGGGGAATTTACCAGCAACGATATTGTCTGCACCAGGA CGCTTTATAATTATGTCGATCAAGGCTTGTTAAACATCCATAACTATGATTTGCCAGAGAAACTCAAGCGCAATACCAAA ATTCATCGCATTCGTAAAAATAAGAAGAAGCTAGGCCGCAGTATTGAACAACGACCACAGGAAGTTAATAAGCGTGATGT GTTTGGGCATTGGGAATGTGATCTTGTTTTAGGCCATAAGACCAAGGACGACGAAGTACTGCTAACTTTGTCTGAACGCA TGAGCCGTGAGTTCCTAATTATTAAAATCCCAGATAAAACAGCTGCTAGTGTAATGAATGCCTTTAAAAGTCTGCGCAAG CAATACAGCGAGCATTGGAACGATATCTTTAAAACTATTACGACTGATAATGGTTCTGAATTTGCGGATCTATCTCAGCT GGAAGATATTTCCAAATCACTAGTTTATTATGCTCATCCATATACTTCTTGTGATAAAGGCACTGTAGAGAGGCATAATG GCCTTATTCGCAGATTCATTCCTAAAGGTGACTATATTCATAACTACTCTCTCCAACAAATCATTGACATTGAAACTTGG TGCAATTCATTGCCAAGAAAGATCTTGGCTTATCATACACCAGATGAAATCTTTGAAAGAGAATTAGATCGCATCTATCA AACAGCCTAA Protein sequence : MDSLHSIMDKRKKGTHLSLEERVIIQTRLKDHCSLRSIAREIGCSPSTIHYEIKRGAVKLYHGKVKRYKAQQGQSVYQNN RRYCGRKSDFLKKHKFIDYVQQHFFEDGWSLDACSNRCTAVGEFTSNDIVCTRTLYNYVDQGLLNIHNYDLPEKLKRNTK IHRIRKNKKKLGRSIEQRPQEVNKRDVFGHWECDLVLGHKTKDDEVLLTLSERMSREFLIIKIPDKTAASVMNAFKSLRK QYSEHWNDIFKTITTDNGSEFADLSQLEDISKSLVYYAHPYTSCDKGTVERHNGLIRRFIPKGDYIHNYSLQQIIDIETW CNSLPRKILAYHTPDEIFERELDRIYQTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 8e-74 | 50 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-73 | 50 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-73 | 50 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-73 | 50 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 7e-72 | 49 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-72 | 49 |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-72 | 49 |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-72 | 49 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 9e-73 | 49 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-48 | 46 |
