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Name : LAC30SC_08380 (LAC30SC_08380) Accession : YP_004292716.1 Strain : Lactobacillus acidophilus 30SC Genome accession: NC_015214 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1617649 - 1620312 bp Length : 2664 bp Strand : - Note : COG0258 5'-3' exonuclease (including N-terminal domain of PolI) DNA sequence : ATGGCAGATAAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCCTTTTACGCTCTTTATCGTCAACTAGA ATCTTTCAAGAGTCCGGACGGCCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGATA TTGATCCGACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTCACTTTTAGAACAAAAATGTACGGCGAATACAAAGGC GGACGTGCAAAAACTCCGGAAGAGTTACTTGAACAAATGCCTTATATTCAAGAAATGCTTCACGATCTGGGCATTAAAAC TTACGAATTAAAGAATTACGAAGCCGACGATATTATTGGTACTTTTGTTGATAAAGGTGAGAAGAACGGCTTTACAACCA CGATCGTAACTGGTGACCGCGACTTGACCCAACTTGCGTCCGACAAGACGACTGTCGAAGTAACTAAATCTGGTGTTTCT CAACTTGAAGCTTATACACCAGAACATATGAAGGAAGTTAATGGGGTAACTCCAACCGAATTCATCGACATGAAGGCTTT GATGGGTGATAGTTCAGATAATTATCCAGGTGTTACAAAAGTTGGCCCTAAAACTGCATCACGTTTGATTCAAAAATACG GTTCCGTTGAAGGGATTTACGATCATATCGACGAAATGAAGAAGTCCAAGCTGAAAGAAAACTTGATCAACGATAAGGAC AAAGCATTTTTAGCTAAAAAGTTAGCAACTATTGACCGTGATTCACCAGTAACTCTGGATATTGATGATATAAAACGTCA GCCAGTTGATTATGAAAAGCTGCGTCAATTCTACGAAAAGATGAACTTCCGCAAGTTCTTAGCTGATTTAAATGCTTCAG GTGCTGGTCAAGATAGTACTGAAGTTGAAAAAGTAGAATACATCGTTTTAAACGATGACAACGTTAAAGATGTTAAAGCC ACTGAAAAAGACACTGTTGAATTTTATCTAGAAATGCTCGGTGCTAACTACCACTTAGCCGATTTTGTCGGCTTTAGCTT GAAGATTAACGACAAGATCTACGTTTCAAGAGACGTTGAATTGCTTGAAGAAGATAATATCAAGCACATCTTAGAAGACG AAAAGATTAAGAAGAATGTCTTTGACCTGAAGAGAACAATGGTTGCTGCACATCGTTTGGGCATTCACACTCACGGCCTT GATTACGACATGCTTTTAGCATCCTACTTGATCAATAATGAAAATAACTCTAACGACCTTGGTGAAATTGCTCACCTTTA TGGTGATTACTCCGTTAAGACTGACCTCGAAGTTTATGGCAAAGGTAAGAGTGAGCACATCCCTGATGACGATGATGAAT TATTCAACCACTTAGCTTCAAAGGTCAACGCCATTGAAAAACTTAAGCCGGAGCTTCTTAAAAAGCTTAAAGAACACGAA CAGGATGCTTTGTTTGACACAATCGAAATCCCAACCGCGCGCGTTTTAGCCAGAATGGAAATGAACGGGATGAAGGTCGA AGCAAGTACTTTAATTCAACTGCAAAATGAATTTACCGTTAAATTGAAGGAACTCGAAGACAAGATTTATGGCCAAGCCG GTGAAAAGTTCAACTTGAACTCACCAAAGCAATTAGGTCACATTTTGTTTGAAAAGCTTGGTTTGCCAGTCATCAAGAAG ACCAAGACTGGTTATTCAACTTCAGTTGAAGTCTTGGATCAATTAAAGACGCAAAGTCCAATCGTTAGTGAAATTTTGGA TTACCGTCAAATTGCCAAGATTCAATCTACCTATGTAAAGGGGCTGCTTGATGTTATCCAACCAGATGGCCGCGTCCATA CACGTTACTTGCAAACTTTGACTGCCACTGGTCGTCTTTCCAGTGTGGATCCTAACTTGCAAAACATCCCTACCCGTACC GAAGAAGGAAAGCAAATCAGAAAAGCTTTCGTGCCAAGTGAACCAGACGGCTACATTTTCTCTTGCGACTACTCACAAGT TGAACTTCGTGTTTTAGCTCATGTTTCTGGTGATCAAAACATGCAAGAAGCCTTCAAGACCGGTTATGATATTCACTCAC ATACCGCGATGAAGATTTTCCACTTGGATTCACCTGATCAAGTAACACCACTGATGCGTCGCCACGCTAAAGCCGTTAAC TTCGGTATTGTTTACGGCATTTCTGATTACGGTTTGTCCAAGAACTTAGGCATTTCTAGAAAACGTGCTCAAGAATTTAT CGACAACTACTTCGAACAATATCCTCAAATCAAGGATTACATGGATAAGGCTGTGCAAGAAGCGCGTGACAAAGGCTATG CCGAAACAATTATGCACCGTCGCAGATACTTGCCAGATATTCACGCTAAGAAGTACACCGTGCGTGCCTTTGCTGAAAGA ACCGCAATCAACTCACCAATCCAAGGTTCAGCTGCCGATATCATCAAGATTGCCATGATTAACATGCAAAAGAAGCTGGA TGAATTGCACCTCAAGACCAAGATGGTAGTTCAGGTGCACGACGAATTAATTTTTGACGTGCCAAAAGATGAACTTGAAA CAATCAAGAAGATTGTGCCAGAAGTAATGCAATCAGCAGTTAAGCTTGATGTGCCACTAATTGCTGATTCTGGTTGGGGC CACAATTGGTACGATGCAAAGTAG Protein sequence : MADKKLLLIDGNSVAFRAFYALYRQLESFKSPDGLHTNAIYAFKNMLDVLLKDIDPTHVLVAFDAGKVTFRTKMYGEYKG GRAKTPEELLEQMPYIQEMLHDLGIKTYELKNYEADDIIGTFVDKGEKNGFTTTIVTGDRDLTQLASDKTTVEVTKSGVS QLEAYTPEHMKEVNGVTPTEFIDMKALMGDSSDNYPGVTKVGPKTASRLIQKYGSVEGIYDHIDEMKKSKLKENLINDKD KAFLAKKLATIDRDSPVTLDIDDIKRQPVDYEKLRQFYEKMNFRKFLADLNASGAGQDSTEVEKVEYIVLNDDNVKDVKA TEKDTVEFYLEMLGANYHLADFVGFSLKINDKIYVSRDVELLEEDNIKHILEDEKIKKNVFDLKRTMVAAHRLGIHTHGL DYDMLLASYLINNENNSNDLGEIAHLYGDYSVKTDLEVYGKGKSEHIPDDDDELFNHLASKVNAIEKLKPELLKKLKEHE QDALFDTIEIPTARVLARMEMNGMKVEASTLIQLQNEFTVKLKELEDKIYGQAGEKFNLNSPKQLGHILFEKLGLPVIKK TKTGYSTSVEVLDQLKTQSPIVSEILDYRQIAKIQSTYVKGLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRT EEGKQIRKAFVPSEPDGYIFSCDYSQVELRVLAHVSGDQNMQEAFKTGYDIHSHTAMKIFHLDSPDQVTPLMRRHAKAVN FGIVYGISDYGLSKNLGISRKRAQEFIDNYFEQYPQIKDYMDKAVQEARDKGYAETIMHRRRYLPDIHAKKYTVRAFAER TAINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVVQVHDELIFDVPKDELETIKKIVPEVMQSAVKLDVPLIADSGWG HNWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 54 |
