Gene Information

Name : LAC30SC_05560 (LAC30SC_05560)
Accession : YP_004292195.1
Strain : Lactobacillus acidophilus 30SC
Genome accession: NC_015214
Putative virulence/resistance : Resistance
Product : Non-heme iron-containing ferritin
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0783
EC number : -
Position : 1116199 - 1116666 bp
Length : 468 bp
Strand : +
Note : COG0783 DNA-binding ferritin-like protein (oxidative damage protectant)

DNA sequence :
ATGAAATATACCAAAACAAAAGAAATTTTAAATCAAGCAGTTGCTGATTTAACTCAACTTATCATGATTACTCGTCAACA
GCATTGGTACATGAGAGGTCCAAACTTTTTGAAACTTCACCCATACCTCGACGATGTTATGGACGAGCTTGATGAACAAA
GAGATTTAATTTCGGAAAGATTAATTACCATTGATGGGTCACCTTATTCAAGTTTATCTGAAGTATTGAAACATACTAAA
CTAGAAGACAAGCCTGGGGAATGGGGCATTTCGACTAAAGATAGATTCAAGACCATTATTGCTGGCTATCGCTATTTAGA
TAAGCTTTATGAAGAAGGAATTAAAGCTAGTGATGAAGAAGGGGACTACGGTAGCAACGATATTTTGACTAGCTGTCATA
CGGATATCGAAAAGAGAATCTGGATGATGCAAGCTGAGATTAATGAAGCTCCTGAAATCGATAAGTAA

Protein sequence :
MKYTKTKEILNQAVADLTQLIMITRQQHWYMRGPNFLKLHPYLDDVMDELDEQRDLISERLITIDGSPYSSLSEVLKHTK
LEDKPGEWGISTKDRFKTIIAGYRYLDKLYEEGIKASDEEGDYGSNDILTSCHTDIEKRIWMMQAEINEAPEIDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0606 NP_814364.1 Dps family protein Not tested Not named Protein 2e-34 47
ef0119 AAM75320.1 EF0119 Not tested Not named Protein 2e-34 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAC30SC_05560 YP_004292195.1 Non-heme iron-containing ferritin BAC0134 Protein 7e-28 42