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Name : LAC30SC_05340 (LAC30SC_05340) Accession : YP_004292155.1 Strain : Lactobacillus acidophilus 30SC Genome accession: NC_015214 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 1080019 - 1081068 bp Length : 1050 bp Strand : + Note : COG2826 Transposase and inactivated derivatives, IS30 family DNA sequence : ATGGACTCTTTACATTTTACCATGAATCAGCACGTTAAAGGCAAGCACTTATCATTTGAAGAGCGGGTTGTTATCCAAAC CCGTTTAAAAGATGGTTGTTCTATTAGAGCGATTGCTCGCGAATTGAGCTGCTCTCCTTCTACAATTAGCTATGAGGTTA AACGTGGTACTGTTTCTCTCTATCATGACAAGCAGCAGCGTTATAAGGCTGATCATGGTCAGAATGTTTATCAGATTAAT CGTCGCCACTGTGGTCGTAAATCAGACTTCTTGAAGAAAGCAGACTTTATTAGCTACGTCATTAAGCATTTCTTTGAGGA CGGCTGGTCACTTGACGTTTGTGCCAATCGTAGCTTAGCTATCGGTGAATTTTCACATCATCAAACAGTCTGCACCAGAA CTTTGTACAACTATGTAGAACAAGGCCTAATTACAATTAAGAACTATGATTTGCCTGAAAAACTTAAACGCAATACCAAG CTCCATCATGTTCGCAAAAATAAGAAAAAGCTGGGACGAAGCATCGAAGAGCGGCCTAAAGAGATTGACCAGCGGAATGA ATTTGGTCATTGGGAATGTGATCTTGTTTTAGGGCATAAAACCAAAGATGATCAGGTTCTATTAACGCTTTCTGAGCGCA TGAGCCGTGAGTTCTTGATTATTCGCATACCTAACAAGACATCTGCCAGTGTCATGCAGGCTTTTAAAATGCTTCAAAAA CAATACAGCGAGCACTGGAATGACATCTTCAAGACGATTACTACTGACAATGGTTCAGAGTTTGCGGATTTAGCTAATTT AGAAGAAGTTTCTAAGACTCTTGTTTATTATGCTCATCCTTATACTTCTTGTGATAAAGGAACTGTTGAAAGACATAATG GTCTTATTCGCAGATTCATTCCTAAAGGAGACTGCATCAATAACTATTCTCTCCAACAAATCATTGATATTGAAACCTGG TGCAACTCTTTACCCAGAAAGATCCTGGCATATCACACACCAGATGAAATCTTCGAAAGAGAATTAGATAAAATCTATCA AACAGCCTAA Protein sequence : MDSLHFTMNQHVKGKHLSFEERVVIQTRLKDGCSIRAIARELSCSPSTISYEVKRGTVSLYHDKQQRYKADHGQNVYQIN RRHCGRKSDFLKKADFISYVIKHFFEDGWSLDVCANRSLAIGEFSHHQTVCTRTLYNYVEQGLITIKNYDLPEKLKRNTK LHHVRKNKKKLGRSIEERPKEIDQRNEFGHWECDLVLGHKTKDDQVLLTLSERMSREFLIIRIPNKTSASVMQAFKMLQK QYSEHWNDIFKTITTDNGSEFADLANLEEVSKTLVYYAHPYTSCDKGTVERHNGLIRRFIPKGDCINNYSLQQIIDIETW CNSLPRKILAYHTPDEIFERELDKIYQTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-76 | 51 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-76 | 51 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-76 | 51 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-76 | 51 |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-76 | 51 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-76 | 51 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-75 | 51 |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-77 | 51 |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-76 | 50 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-50 | 46 |
