Gene Information

Name : ACMV_34140 (ACMV_34140)
Accession : YP_004285643.1
Strain : Acidiphilium multivorum AIU301
Genome accession: NC_015186
Putative virulence/resistance : Virulence
Product : type VI secretion system family protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3709047 - 3711695 bp
Length : 2649 bp
Strand : -
Note : -

DNA sequence :
ATGGCTGCTATCGATCTCAAATCTCTGATCGCCCGCCTCGACGACCACTGCCGCCGCAGCCTCGAGGCCGCAGCCGGCCT
AACGCTGTCGCGAAGCCATTACAACGTCGAAATCGAACATTGGCTGCTCAAGCTCGCCGATGGCACCGACACCGACATTC
CGCTTATTCTTCGACATTACGAGATCGATATCGGTCGTTTCTTGATCGATCTCAACCGCGCGCTCGACCGGATGAAGACC
GGCAACGCCCGCGCCCCGGCCCTGTCACCGGAAGTCGTCGAGCTCGCGAAACAGGCCTGGCTGCTGGCATCGGTCGAACA
CGGGCTGAGCCGCACGCGCTCGGGTCACCTGCTTTGGGCCCTGCTGGCCGACGAGACCCTAGCCCGCCACGCCCGCGAGG
CCTCCAGCCATTTCGCAAAAATCCAGCCGGACGCACTGAAGCGCGACTTCAACGCCATCACCGCCAATTCCATCGAGGCG
CAGACCGCGACCCGCGCGACCGATGGCGCGCCGGCCACGGGCGGCACCGATGACGGCACGCCCCGTCCCGGCGGCTCGGC
GGCGCTGGACCAGTTCACCGAAGATCTGACCGCCCGCGCGCGCGCCGGCCGGATCGACCCGATCCTCGGCCGCGACTTCG
AAATCCGCCAGGCGATCGACATCCTCACCCGCCGCCGGCAGAACAACCCGATCTTCACCGGCGAGGCAGGTGTGGGCAAG
ACCGCGGTGGTCGAGGGCATCGCGCTGAAGATCGCCCAGGGCGACGTGCCGGAGGCGCTGAAGAACGTCACGCTGCGCAC
GCTCGACATGGCGCTGCTCCAGGCCGGGGCGGGCATGAAGGGCGAGTTCGAGAACCGGCTGAAATCGGTGATCGACGAGG
TGAAGGCCTCGCCGAAGCCGATCATCCTGTTCATCGACGAGGCGCACACGCTGATCGGCGCCGGCGGCCAGGCCGGCCAG
AACGACGCGGCAAACCTGCTCAAGCCCGCCCTCGCCCGCGGCGAGCTGCGCACCATCGCGGCGACGACCTGGGCCGAATA
CAAGAAATATTTCGAGCGCGATGCCGCGCTGACCCGCCGCTTCCAGGTGGTCAAGGTCGAGGAGCCGTCCGAGGCGATGG
CCACCGCGATGATCCGCGGCCTCGTCGGCACGCTCGAGAAGCACCACAAGGTCCGCATCCTCGACGAGGCGGTGAGCGAG
GCCGTCAGGCTGTCGGCGCGTTATATTCCCTCACGCCAGCTGCCGGACAAGGCGATCTCGCTGATCGACACGGCCTGCGC
CCGCGTTGGCATGAGCCAGGCGACCGAACCCGCCCCGATCGAGGATCGCCGCCGCCGGATCGACCTGATCGACACCGAAA
CCGGCATCCTCCGCCGTGAGATGGCCAGCGGCGGCGATCACGCCGCCCGCGAGGCCGAACTGATCGAGGAGCGTGCGCGG
CTGGTCGCCGAACTCGCCGAGCTCGAGGCCCGCTTCGCGACCGAGAAGCAGCTCGCCGGCGACATCGCCGAGCTGCGCAC
CCGGCTGGAAGACGACGCGAACGCGGAGGACAAGGACGCGCTGCGCGCCAGCCTCGCCGAAAAGACCGCGGCGCTGAAGG
CCTCGCAGGGCGAGAACCCGCTGATCTTCCCGGTGGTCGACGGCCAGGCCGTCGCCGAGATCGTCGAGAGCTGGACCGGC
ATTCCCGCCGGGCGCATGCAGTCCGACGAGATCAACACGGTGCTGAAGCTGAAGGAGGCGATGGAGCAGCGCATCGTCGG
CCAGCCCCATGCGCTCGAGGCGGTCGCCCAGGCGATCCGCACCTCGCGCGCGAAACTCACCGACCCGCGCAAGCCGATCG
GCGTCTTCATGATGGTCGGCACCTCCGGCACCGGCAAGACCGAAACGGCGCTTACCCTCGCCAACCTGCTCTATGGCGGC
GAGCAGAACATGACCACCATCAACATGACCGAGTTCAAGGAAGAACATAAGGTCAGCCTGCTGATGGGCAGCCCGCCCGG
CTATGTCGGCTATGGCGAGGGCGGCGTGCTGACCGAGGCGGTGCGCCGGCGCCCCTATTCGGTGGTGCTGCTCGACGAGA
TGGAAAAGGCCCATCCCGGCGTGCAGGACGTCTTCTTCCAGGTGTTCGACAAGGGCAACATGAAGGACGGCGAAGGCCGC
GACATCGACTTCAAGAACACCATCATCATCATGACGTCGAATGCCGGCACCGACCTGATCGAGAAACTCTTCGCCGATCC
CGAAACCGCGCCGGACGCCGCCGCCCTCGCCGAGGCGCTGCGGCCGGAGCTGCTGAAATATTTCAAGCCCGCCTTTCTCG
GCCGCGTCACCATCGTCCCCTATTTCCCGCTCTCCGACGAGGTGATCCGCCAGATCGTGGTGCTCCAGCTCAACAAGATC
GCGAAGCGCGTGCGCGAGGGCTACAAGGCCGAATTCACCTACGAGCCCGCGCTCGTCGAAACCATTGCCGCACGCTGCAA
GGAATCGGCCTCGGGCGCGCGCAACGTGGAAAACATCCTCTCCCGCACGCTGCTGCCCGAACTCTCGGCCGAGGTTCTGG
CCAGGCTTGCCGAAGGCGAGATGATTTCCCGCGTGACGGTGGGCACATCCGAAGACGGGATGTTCCGCTACACCATCAAT
CAGGCTTAA

Protein sequence :
MAAIDLKSLIARLDDHCRRSLEAAAGLTLSRSHYNVEIEHWLLKLADGTDTDIPLILRHYEIDIGRFLIDLNRALDRMKT
GNARAPALSPEVVELAKQAWLLASVEHGLSRTRSGHLLWALLADETLARHAREASSHFAKIQPDALKRDFNAITANSIEA
QTATRATDGAPATGGTDDGTPRPGGSAALDQFTEDLTARARAGRIDPILGRDFEIRQAIDILTRRRQNNPIFTGEAGVGK
TAVVEGIALKIAQGDVPEALKNVTLRTLDMALLQAGAGMKGEFENRLKSVIDEVKASPKPIILFIDEAHTLIGAGGQAGQ
NDAANLLKPALARGELRTIAATTWAEYKKYFERDAALTRRFQVVKVEEPSEAMATAMIRGLVGTLEKHHKVRILDEAVSE
AVRLSARYIPSRQLPDKAISLIDTACARVGMSQATEPAPIEDRRRRIDLIDTETGILRREMASGGDHAAREAELIEERAR
LVAELAELEARFATEKQLAGDIAELRTRLEDDANAEDKDALRASLAEKTAALKASQGENPLIFPVVDGQAVAEIVESWTG
IPAGRMQSDEINTVLKLKEAMEQRIVGQPHALEAVAQAIRTSRAKLTDPRKPIGVFMMVGTSGTGKTETALTLANLLYGG
EQNMTTINMTEFKEEHKVSLLMGSPPGYVGYGEGGVLTEAVRRRPYSVVLLDEMEKAHPGVQDVFFQVFDKGNMKDGEGR
DIDFKNTIIIMTSNAGTDLIEKLFADPETAPDAAALAEALRPELLKYFKPAFLGRVTIVPYFPLSDEVIRQIVVLQLNKI
AKRVREGYKAEFTYEPALVETIAARCKESASGARNVENILSRTLLPELSAEVLARLAEGEMISRVTVGTSEDGMFRYTIN
QA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-158 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ACMV_34140 YP_004285643.1 type VI secretion system family protein VFG2076 Protein 0.0 52
ACMV_34140 YP_004285643.1 type VI secretion system family protein VFG2084 Protein 4e-144 44