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Name : Dester_0808 (Dester_0808) Accession : YP_004281508.1 Strain : Desulfurobacterium thermolithotrophum DSM 11699 Genome accession: NC_015185 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 815135 - 816673 bp Length : 1539 bp Strand : - Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IPR002313: IPR004365: IPR004364; KEGG: pmx:PERMA_1426 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, DNA sequence : ATGGCTGAAGAAAGAATAGTTGAACAGAGAAAAGAGAAAATTGAAAGACTAAAAGAGCTTGGCTATGAACCTTACGCTTA CAAGTACGAGGTAACAACTACTGCAAAAGAGCTCCTTGATAAATTTGGAAGACATAAAGAAGGAGAAGACAAAGAAAAAG AACAATTACCGGAGGAAGAATTTTCTCTTGCCGGAAGAATAGTCTCTATGAGAGTCATGGGTAAAGCTGCTTTTTTCCAC ATTCAGGACGGAACTGAAAAAATTCAGTGTTACGTTAGAAGAGATTTAGTAGGAGAAGAGTTTTACAACAAAATCTTCAA AAAATTAATTGATATAGGTGACATAGTTGGAGTTAAGGGAAAGCTTTTCAGAACACGAACTGGAGAGTTAACTCTTGAAA CTTTCCAGATAACACTTTTAACAAAATCTCTTAGACCTTTGCCTGAAAAATGGCACGGTCTTACAGACGTCGAAAAGAGA TATAGACAAAGATATCTTGATCTGATAGTTAATCCTCAGGTAAGAGAAATCTTTAGAACAAGAACAAAGATAATAAAGAA ATTGAGAGAGTTTTTAGACAGTAAAGGATTTATGGAGGTTGAAACTCCTATCTTGCAGCCGATAGCATCAGGTGCAGCTG CAAAGCCTTTCATCACTCATTACAATGCTCTTGACATAGATGTTTATCTTAGGATTGCTCCTGAACTTTATCTAAAAAGA CTTTTAGTTGGTGGTTTTGAAAGAGTTTACGAGCTTGGAAAGAACTTCAGAAATGAAGGAATTAGTACAAGACACAACCC AGAGTTTACAATGGTAGAGTTCTATATGGCCTATGCAGATTACAACGATTTGATGGAACTAACTGAAGAGCTCTTTGAGT ACTTGCTTGACGAAATTTTCGGTAAAGGAGCAAGAGAAATAGAGTATCAAGGAACTAAACTCTCTTTCAAAAGACCGTTT AGGAGAATTTCCTATCTTGAAGAGCTCTCAAAGAAAACAAGTCTGACAGAAGACGAGCTCCTACACGATGAAGAAAAAGT GCTTGAAAAAGCAAAGGAAGTAGGAGTTGAGAATGCAGAAAAACTTTCCCACTTTAAAAGAGTTCAAGAGCTCTTTGAAG CCTTAATAGAACCAGAGCTTATTCAACCGACCTTTGTTATAGATTTTCCTAAAGCAATATCTCCGCTTGCAAAAGAAAAA AGAGGAAACCCTGAGCTTGTTGAAAGATTTGAGCTTTTTATCTTTGGTAGAGAAATTGCTAACGCTTACACAGAGCTTAA TAACCCAGAGGAACAGGAAGCAAGATTTAGACAACAGCTTGAAGAAAAGGCAAAAGGTGACGACGAAGCAATGGAATACG ATGCAGACTTTATAACAGCTCTTGAGTACGGAATGCCTCCAACGGCTGGAGAAGGAATAGGAATTGATAGACTCGTAATG CTCTTTACAGATAAAGATTCAATTAGAGAAGTTTTGCTTTTCCCTCAGCTAAGACCGGAAAAGAAGCACCACGTAGAAGA AACTAAAGACTCAAACTAA Protein sequence : MAEERIVEQRKEKIERLKELGYEPYAYKYEVTTTAKELLDKFGRHKEGEDKEKEQLPEEEFSLAGRIVSMRVMGKAAFFH IQDGTEKIQCYVRRDLVGEEFYNKIFKKLIDIGDIVGVKGKLFRTRTGELTLETFQITLLTKSLRPLPEKWHGLTDVEKR YRQRYLDLIVNPQVREIFRTRTKIIKKLREFLDSKGFMEVETPILQPIASGAAAKPFITHYNALDIDVYLRIAPELYLKR LLVGGFERVYELGKNFRNEGISTRHNPEFTMVEFYMAYADYNDLMELTEELFEYLLDEIFGKGAREIEYQGTKLSFKRPF RRISYLEELSKKTSLTEDELLHDEEKVLEKAKEVGVENAEKLSHFKRVQELFEALIEPELIQPTFVIDFPKAISPLAKEK RGNPELVERFELFIFGREIANAYTELNNPEEQEARFRQQLEEKAKGDDEAMEYDADFITALEYGMPPTAGEGIGIDRLVM LFTDKDSIREVLLFPQLRPEKKHHVEETKDSN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-110 | 52 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-78 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dester_0808 | YP_004281508.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 1e-110 | 52 |
