|
Name : Dester_0612 (Dester_0612) Accession : YP_004281322.1 Strain : Desulfurobacterium thermolithotrophum DSM 11699 Genome accession: NC_015185 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 621047 - 621949 bp Length : 903 bp Strand : - Note : COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR000644: IPR004800: IPR001347; KEGG: pmx:PERMA_0165 arabinose 5-phosphate isomerase; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; PRIAM: Arabinose-5-phosp DNA sequence : TTGAAAAATTTAGCAGAGCATCTTGATGAAAATTTTGAAAAAGCAATTGACATACTCTATAAGACTAAAGGTAGAGTTGT TCTTACTGGAATTGGCAAATCAGGATTAATCTGTAAGAAAATAGCAGCTACCCTTTCAAGCACAGGAACTCCTGCATTTT TTCTTCATCCAGCCGATGCTGCTCATGGTGATCTTGGCATGATTAAAGGAGATGATACTGTTATAGCTATTTCAAATAGT GGAGAAACTGCTGAACTTTTAAATATTATTCCAATAATAAAAAGTTTTGGAATTCCTATAATTGCAATAACAAATAATCC TGAATCGTCTCTTGCAAAACTTTCAGATGTAACACTTCTTCTTCATGTTAAAAAAGAAGCCTGTCCACTTGGCCTAGCAC CTACAACTTCAACAACTACAACTTTAGCTTTAGGTGATGCTATTTCGGTAGCACTAATGAAACTAAAAAAGTTTAAAAGC GAAGATTTTGCAAGATTTCATCCTGGTGGAAAGTTAGGAATAAGATTAGCTAAGGTTAAGGATATTATGAGAAAAGGGGA TTCCGTTCCAATAGTTTCTCCTGAAACTTCTTTAAAAGAAATCATTTATGAAATATCGTCAAAAAAACTTGGAGCTACAT TAGTTGCAAAAAATGGAAGACTTATTGGAATAATCACTGACGGAGACTTAAGAAGGGCTTTTGAAAAACAAATTGATTTT AATATGAAAGCTTGTGAATTAATGACTAAAAATCCAAAAACAATTTCAGGAGAAGTTTTTGCTGAAAAAGCAATAGAGCT TATGGAAAAGTACAAAATTACTGTTCTTCCTGTTGTTAAAAACGATAAAAAAATCGTAGGAATTATTCACATGCACGACA TCTTAGGAAGGAGAATAAGTTAA Protein sequence : MKNLAEHLDENFEKAIDILYKTKGRVVLTGIGKSGLICKKIAATLSSTGTPAFFLHPADAAHGDLGMIKGDDTVIAISNS GETAELLNIIPIIKSFGIPIIAITNNPESSLAKLSDVTLLLHVKKEACPLGLAPTTSTTTTLALGDAISVALMKLKKFKS EDFARFHPGGKLGIRLAKVKDIMRKGDSVPIVSPETSLKEIIYEISSKKLGATLVAKNGRLIGIITDGDLRRAFEKQIDF NMKACELMTKNPKTISGEVFAEKAIELMEKYKITVLPVVKNDKKIVGIIHMHDILGRRIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 9e-45 | 47 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 4e-45 | 46 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 7e-45 | 46 |
