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Name : Dester_0558 (Dester_0558) Accession : YP_004281268.1 Strain : Desulfurobacterium thermolithotrophum DSM 11699 Genome accession: NC_015185 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 567178 - 568884 bp Length : 1707 bp Strand : - Note : COGs: COG2804 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR013374: IPR007831: IPR001482; KEGG: ddf:DEFDS_1109 type IV pilus assembly protein PilB; PFAM: type II secretion system protein E; General secretory sys DNA sequence : ATGCTTAAAGCTGATGAAGATAAACTAAAGGAATTTATCTTTAAGCGCTTAGGAATTTCTTCTAAATCGCTAAAGGATGG AGAGGAAGATTGGCTTAAGTATCTTGTTAACTCAAAATTAGCTACAGAAGAAAAACTTTTATCTCTTCTTTCTGAATATT TTAAAGTTCCCTCCGTTGATTTAAGAAGGATTTCTATTCCTCCGATAATTGCAAAAATTATTCCAAGAACTACTGCCGAG AAGTTCATTTTAATTCCATTTGCAAAATCAGGACCAACTTTAAAATTAGCAATGTTTGATCCTTCAGACATTCAAACGAT AGAAAAAGTCCGCTTTTCAACTGGATTTAGAATACAGCCTTTTGTTGCCTTGCCATTTAGAATTAAGGAAAAGATAGAAA AAATTTATGGAAAAGCTGAAGAAGAATTTTTTTCAAAGCTAAAAAATGAGCTTATTAGAGAAAAGGAAAAAGACTTAGAA ACGGAAGAAATTAATCTCAGTTCTAATATTGTCTCTTTAGATGACTTAAAGCAGCTTGCAACTCAAGCTCCTATAGTAAA GTTAGTTAATGCAATAATTATAGAAGCTCTTAATAAAGGAAGTAGTGACATTCACATTGAACCTTTTGAGAAAGAGCTCA GGATTAGATACAGAATAGATGGAGTTCTTCACTTAGCCGCAAAGTATCCTTCAGAAGTAAAAGATGCTGTTGCAGCGAGA TTAAAAGTACTTAGCAATCTCGATATAGCTGAAAAAAGACTTCCTCAAGATGGAAGAATAAAAGTTAGATTTAAAGGAAG AGAAATTGACTTTAGAGTTTCTACTGTACCAACAATTTATGGGGAAAAAATTGTTTTAAGGATTCTTGATAAGGAAAGTC TAAAACTTGATCTTTCAGAATTGGGATTAGAGGATAGAGAATATAAGCTACTTACAAGAGCAATACGTTCTCCTTATGGA ATGATTCTTGTAACAGGTCCAACAGGTTCAGGAAAAACTACTACTCTTTACTCTTCGCTCCTTGCAATAAATACTCCTGA AATCAATATAATGACTGTCGAAGACCCTGTTGAGTATAATCTTTATGGAGTTAATCAAGTACATGTTAAACCAGAAATAG GATTAACTTTTTCAAGAGCTCTAAGAGCTTTCTTGCGTCAAGACCCAGACGTTATAATGGTTGGAGAAATTCGAGATACT GAAACTGCAGAAATAGCTATTGAAGCAGCTCTTACGGGACACCTTGTCCTTTCTACTCTTCATACAAATGATGCTCCAAG TACAGTTACAAGGCTTATTGATATGGGAATAGAAAACTTTCTCGTTTCATCTTCAATTATATTGATTGTTGCTCAAAGAC TAGCAAGACGTATATGTCCTTACTGTAAAGAACCTTATCAGTATCCTTTAGAAGTTTTAAAAGAAATCGGTTTTACCGAA AAAGAGATTTTTTCTTTTCAACCGTTTAGAGGCAAAGGTTGTGAACAGTGCAATTTTACCGGTTATAAAGGAAGAGTAGC TCTTTATGAAGTTATGGAAATGACACCAGAAATAAGAGATGCAATAATCAAAGGAAAAAATACTGACGAAATAAGAAAAA TAGCGGTAAAATACGGAATGAGAACATTAAGAGAAATTGGAAAGGCTAAAATTTGCAAAGGAATAACAACACCAGAAGAA GTTCTTCGGGTTACAAGGAACTATTGA Protein sequence : MLKADEDKLKEFIFKRLGISSKSLKDGEEDWLKYLVNSKLATEEKLLSLLSEYFKVPSVDLRRISIPPIIAKIIPRTTAE KFILIPFAKSGPTLKLAMFDPSDIQTIEKVRFSTGFRIQPFVALPFRIKEKIEKIYGKAEEEFFSKLKNELIREKEKDLE TEEINLSSNIVSLDDLKQLATQAPIVKLVNAIIIEALNKGSSDIHIEPFEKELRIRYRIDGVLHLAAKYPSEVKDAVAAR LKVLSNLDIAEKRLPQDGRIKVRFKGREIDFRVSTVPTIYGEKIVLRILDKESLKLDLSELGLEDREYKLLTRAIRSPYG MILVTGPTGSGKTTTLYSSLLAINTPEINIMTVEDPVEYNLYGVNQVHVKPEIGLTFSRALRAFLRQDPDVIMVGEIRDT ETAEIAIEAALTGHLVLSTLHTNDAPSTVTRLIDMGIENFLVSSSIILIVAQRLARRICPYCKEPYQYPLEVLKEIGFTE KEIFSFQPFRGKGCEQCNFTGYKGRVALYEVMEMTPEIRDAIIKGKNTDEIRKIAVKYGMRTLREIGKAKICKGITTPEE VLRVTRNY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-82 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-83 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dester_0558 | YP_004281268.1 | type IV-A pilus assembly ATPase PilB | VFG0182 | Protein | 2e-93 | 50 |
| Dester_0558 | YP_004281268.1 | type IV-A pilus assembly ATPase PilB | VFG1876 | Protein | 3e-83 | 48 |
| Dester_0558 | YP_004281268.1 | type IV-A pilus assembly ATPase PilB | VFG0112 | Protein | 2e-97 | 46 |
| Dester_0558 | YP_004281268.1 | type IV-A pilus assembly ATPase PilB | VFG1880 | Protein | 4e-98 | 45 |
| Dester_0558 | YP_004281268.1 | type IV-A pilus assembly ATPase PilB | VFG2048 | Protein | 6e-84 | 45 |
