Gene Information

Name : Dester_0534 (Dester_0534)
Accession : YP_004281244.1
Strain : Desulfurobacterium thermolithotrophum DSM 11699
Genome accession: NC_015185
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 543327 - 544013 bp
Length : 687 bp
Strand : -
Note : COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078: IPR001608; KEGG: pmx:PERMA_0107 pyridoxal phosphate enzyme, YggS family; PFAM: Alanine racemase, N-terminal; SPTR: Pyridoxal phosphate enzyme, YggS family; TIGRFAM: pyridoxal phosphate-depen

DNA sequence :
ATGGGAATTAGAGAAAACGTTAAAAGAATAAAAGAACGTATAGAAAAGGCCTGTGAAAGAGCAAAGAGAAATCCAGACGA
AGTTTTTATTCTCGCAGCTTCAAAAACAAGAGCTCCCGAAGAAATAAGAAAGGCCTTTGAAGCAGGAATTAAATTGTTTG
GTGAAAATAGAGTTCAAGAAGCAAGGGAGAAAATACCTCTTTTATCAGACATTCCGATTGAATGGCATATGATTGGACAT
CTCCAAAAGAATAAGGTCAAGTATGCTGTAAACCTTTTTAAGGTTATTGAATCTGTTGATTCTAAGGAACTTGCAGATGA
ATTGGAAAAAAGACTTTCTAAGATTGGAAAAAAACTAGAAGTTTTTATAGAAGTAAAACTTTCTCCTGAAGAAACTAAGC
ATGGTTGTTCTCCTAATGAAGTTGAGGAACTTGCAAGATACGTGTTAGAACTAAAACATTTAGATCTAAAAGGATTAATG
ACTGTTCCTCCCTATTTTGAAGATGTAGAACTTGTAAGACCTTACTTTAGAAGATTAAGAAAAATAAGAGATAGATTAGA
AGACTCTCTTGGAATGAAAATTCCTCACCTTTCAATGGGAATGTCTCACGACTTTGAAGTAGCAGTAGAAGAAGGAGCTA
CAATTGTTAGAATTGGAACCGCTATTTTTGGTCCAAGAAACTACTAA

Protein sequence :
MGIRENVKRIKERIEKACERAKRNPDEVFILAASKTRAPEEIRKAFEAGIKLFGENRVQEAREKIPLLSDIPIEWHMIGH
LQKNKVKYAVNLFKVIESVDSKELADELEKRLSKIGKKLEVFIEVKLSPEETKHGCSPNEVEELARYVLELKHLDLKGLM
TVPPYFEDVELVRPYFRRLRKIRDRLEDSLGMKIPHLSMGMSHDFEVAVEEGATIVRIGTAIFGPRNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-30 41
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-30 41
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-30 41
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-30 41