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Name : Dester_0385 (Dester_0385) Accession : YP_004281099.1 Strain : Desulfurobacterium thermolithotrophum DSM 11699 Genome accession: NC_015185 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 381111 - 382706 bp Length : 1596 bp Strand : - Note : COGs: COG2804 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR013369: IPR007831: IPR001482: IPR003593; KEGG: gem:GM21_0608 general secretory pathway protein E; PFAM: type II secretion system protein E; General sec DNA sequence : ATGTTAAGTGAAAAAGTCTTTTTGAAAAAGCTTAAAGAAGAGGAATTAATTCCTAATAAAGATTTTTCTTCTTTTAAAGA AGTTGTTGGGATACTAAGATGGGAAAATCCTAAGCTTAAATCTCTTTTTGAAGAATTAGGTTTTCCATTCCTTGAAAAAC TCCCTCAGCCGCAAAGAGAAGTTCTTGAGAAAGTTAGTCCTTCTTTTTTAAGAAAAGAACGGTTAATTCCATTAGAAGAA GATGAAAATGAAGTAGAAGTTGCAACTGATAATCCTTTTAACCTTGAAGGAATAAAAAAAATTGAGTGGATATTTGCTAA ACCGGTTAAAATAGTTGTTATTCCGTTTGATGAAGTTAACAAATTCTTAATGGCAAAGGAAGAAACGGAAGAAAAAGAAG AAGTCATCGACCAGTATGGAGAAGATATTTTAACTCTTCAAGAAGAAGCACCAACTATTCAACTTATTAATGATATCCTA ATGACAGCAGTTAGAATAAAAGCAAGTGATATTCACTTTGAGCCTTTTAAAGATAGAATGAGAGTAAGACTTCGTATTGA TGGAGTCTTAAAAACTCTTAAAGAAATACCACCTTCTAAAATTCCTTCGGTTGTTTCAAGGCTAAAAATTATGGCAAACC TTGATATTGCAGAAAAAAGACTTCCTCAAGATGGAAGGATAATGATAAAAGTAGGTGGAAAAGAAGTTGACATTCGTGTT TCTACTCTTCCAACCTACTTTGGAGAAAGAGTTGTTTTAAGACTTTTATCAAAGGAAAGTATCCTTTATTCTACAAAAGA GTTGGGACTTCTTGATAAAGAATATAAAAAGTTTAAAAAACTAATTCATACTCCTCACGGCATAATCTTAGTAACTGGAC CTACAGGTTCAGGTAAAACTACTACTCTTTATGCAGCTCTTTCAGAAATAAACAGTGAGGAGATAAACGTAATTACTGTT GAAGATCCTGTTGAGTATCAGCTTGACGGTATATCGCAAGTACAGGTAAAACCAGATATTGGTCTTACATTTGCAAGTGC CTTAAGAAGTATCTTACGTCAGGATCCAGATGTGATAATGATTGGAGAGATTAGAGATATAGAAACTGCCGAAATTGCAA TTCAATCAGCTTTAACTGGACATCTTGTCTTCTCTACTCTTCATACAAACGACTCAGCAACTTCAGTTACAAGGCTTCTT GATATGGGTATAGAACCTTTCTTAGTTGCATCGTCTGTAATAGGAGTAATTGCTCAAAGACTTGTGAGAAAAATTTGTCC TCACTGTAAAACTTCTTATGAACCTACAGATGAAGAACTTAGAGAAATTGGATTAACAAACTTTGAAGGAAAACTTTTTA AAGGAGCCGGTTGCGAACAGTGTATGGGAACAGGATATCTTGGAAGAACGGCAATATATGAAATTTTAATTGTTGATAAA GAAATAAGAAGTGCTGTACTTGAAAGTAAGGATGCTGACGTTATAAAAAACCTTGCAGTAAAAAAAGGTATGAAAACGCT TAGAATGGATGGAGCTGAAAAAGTTAAACTTGGAATAACAACTATTGAGGAAGTTCTTAGAGTAACGAGAGGCTAA Protein sequence : MLSEKVFLKKLKEEELIPNKDFSSFKEVVGILRWENPKLKSLFEELGFPFLEKLPQPQREVLEKVSPSFLRKERLIPLEE DENEVEVATDNPFNLEGIKKIEWIFAKPVKIVVIPFDEVNKFLMAKEETEEKEEVIDQYGEDILTLQEEAPTIQLINDIL MTAVRIKASDIHFEPFKDRMRVRLRIDGVLKTLKEIPPSKIPSVVSRLKIMANLDIAEKRLPQDGRIMIKVGGKEVDIRV STLPTYFGERVVLRLLSKESILYSTKELGLLDKEYKKFKKLIHTPHGIILVTGPTGSGKTTTLYAALSEINSEEINVITV EDPVEYQLDGISQVQVKPDIGLTFASALRSILRQDPDVIMIGEIRDIETAEIAIQSALTGHLVFSTLHTNDSATSVTRLL DMGIEPFLVASSVIGVIAQRLVRKICPHCKTSYEPTDEELREIGLTNFEGKLFKGAGCEQCMGTGYLGRTAIYEILIVDK EIRSAVLESKDADVIKNLAVKKGMKTLRMDGAEKVKLGITTIEEVLRVTRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-92 | 51 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-92 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dester_0385 | YP_004281099.1 | general secretory pathway protein E | VFG0182 | Protein | 2e-98 | 54 |
| Dester_0385 | YP_004281099.1 | general secretory pathway protein E | VFG1876 | Protein | 5e-96 | 52 |
| Dester_0385 | YP_004281099.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-94 | 52 |
| Dester_0385 | YP_004281099.1 | general secretory pathway protein E | VFG0233 | Protein | 5e-86 | 48 |
| Dester_0385 | YP_004281099.1 | general secretory pathway protein E | VFG2426 | Protein | 8e-76 | 44 |
| Dester_0385 | YP_004281099.1 | general secretory pathway protein E | VFG1880 | Protein | 1e-84 | 43 |
