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Name : Dester_0035 (Dester_0035) Accession : YP_004280754.1 Strain : Desulfurobacterium thermolithotrophum DSM 11699 Genome accession: NC_015185 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 32291 - 32749 bp Length : 459 bp Strand : + Note : COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: trq:TRQ2_0694 SsrA-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-bindin DNA sequence : ATGGCAGGAAGAACGCCAGAAATAAAGAACAAAAAAGCTTTTTATGACTATGAAATACTTGAAAAATATGAAGCAGGAAT AGAACTTAAAGGAACTGAGGTAAAATCTTTAAGGGAAGGAAAGGCAAATTTAAGGGATTCATTTGTAAGGATAGAAAACG GAGAAGCTTTCCTATTTAATGCCTATATTGCTCCTTATACTCATGGAAATCTTTTTAATCACGAACCAAATAGAAAGAGA AAACTTCTTCTTCATAAGTCTGAGATAAAAAGACTTTTAGGAAAAACACAAGAAAAGGGTCTCACTATTGTTCCTTTGAG AATGTACTTTAACAAAAGAGGAAAAGTAAAAGTAGAGATAGCTCTTGTTAAGGGTAAGAAAAAGTATGATAAAAGAGAGG CTATAAAAAGACGAGAGCTTGAAAGAGAAGCACAAAAAGCAATGAAATATTATAGATAA Protein sequence : MAGRTPEIKNKKAFYDYEILEKYEAGIELKGTEVKSLREGKANLRDSFVRIENGEAFLFNAYIAPYTHGNLFNHEPNRKR KLLLHKSEIKRLLGKTQEKGLTIVPLRMYFNKRGKVKVEIALVKGKKKYDKREAIKRRELEREAQKAMKYYR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-29 | 53 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 5e-31 | 49 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 2e-22 | 43 |
