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Name : Dester_1162 (Dester_1162) Accession : YP_004281857.1 Strain : Desulfurobacterium thermolithotrophum DSM 11699 Genome accession: NC_015185 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1164306 - 1165592 bp Length : 1287 bp Strand : + Note : COGs: COG0172 Seryl-tRNA synthetase; HAMAP: Seryl-tRNA synthetase; InterPro IPR015866: IPR002314: IPR002317; KEGG: pmx:PERMA_1558 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class DNA sequence : ATGATTGATATAAAACTTCTTAGAAAAGAACCAGAAAAGGTTAAAGAACTCCTTTCAAGAAGAGATAAAAAATATATTGC AATGGTTGACGAACTTCTTGCCGTTGATAGTGAAAGAAGAGCTATCATCTCAGAGGTTGAAGATTTAAAGGCAAAAAGAA ATAAATATTCAAAAGAGATAGGAAAGCTCTTTAAAGAAGGAAGGAAAGAAGAAGCTCTTAAACTTAAATCAGAAGTAGAA AAAATATCAGAAAGAATTGTAAGCCTTGAAAAAGAACTTACAGATATAGAAAAAAAGTTTGAAAGATTGATTCTTTCCAT TCCAAATCCTCCTCACGTTTCTGTTCCTATCGGAGAAGACGAAGAAGACAACGTAGTTATCAGATACTGGGGTGAAAAAC CAGAATTTTGTTTTGAACCTTTACCTCACTGGGATATTGCAAAAGAGCTTAATATTCTCGATTTTGAAAGAGCTACAAAG CTTGCAGGTTCAAGATTTGTTATTTACAAAAAGTGGGGAGCAAAATTAGAGAGAGCTCTCATAAACTTTATGCTTGACCT TCACACAAGCAATCACGGTTATGAAGAAATAATACCGCCATTTCTTGTTAACACAAAAACAATGACAGGAACAGGACAAC TTCCAAAGTTTGAAGAAGACCTATATAAGATCGAAAATGAAGATCTTTGGCTTATACCAACAGCAGAAGTTCCTCTGACA AATATTCACGCTGGAGAAATACTTCCTGAAAAAGAGCTTCCAAAGTACTATACAGCTTATACTCCTTGTTTTAGGAGAGA AGCTGGTGCTCATGGAAGAGACGTTAGAGGAATAATGAGACTTCACCAATTTAACAAAGTTGAGCTTGTAAAAATAGTTC ATCCAGAGACTTCCTACGAAGAGCTTGAAAAACTTGTTAGAGAAGCTGAAAAAGTCTTACAGCTTTTAGGACTTCACTAT CGCGTAGTGGAGCTTTGTACAGGAGACCTCGGATTCTCTGCTGCAAAAACCTACGATATAGAGGTATGGATACCTTCTCA GAACAAGTATAGAGAAATATCTTCATGCTCAAATTGTGAAGATTTCCAAGCAAGAAGAGCTAAAATACGTTTTAGAGACA AAAATGGCAAAACAAGATTTGTTCATACTCTAAACGGTTCGGGGTTAGCCGTTGGAAGAACTGTAATTGCAATCCTCGAG CAGTATCAGCAGGAGGATGGTTCAGTTATCGTCCCAGAGGTTTTAAGGGATTACATTAAAGTTGACGTATTAAGTAGCGA AATGTAA Protein sequence : MIDIKLLRKEPEKVKELLSRRDKKYIAMVDELLAVDSERRAIISEVEDLKAKRNKYSKEIGKLFKEGRKEEALKLKSEVE KISERIVSLEKELTDIEKKFERLILSIPNPPHVSVPIGEDEEDNVVIRYWGEKPEFCFEPLPHWDIAKELNILDFERATK LAGSRFVIYKKWGAKLERALINFMLDLHTSNHGYEEIIPPFLVNTKTMTGTGQLPKFEEDLYKIENEDLWLIPTAEVPLT NIHAGEILPEKELPKYYTAYTPCFRREAGAHGRDVRGIMRLHQFNKVELVKIVHPETSYEELEKLVREAEKVLQLLGLHY RVVELCTGDLGFSAAKTYDIEVWIPSQNKYREISSCSNCEDFQARRAKIRFRDKNGKTRFVHTLNGSGLAVGRTVIAILE QYQQEDGSVIVPEVLRDYIKVDVLSSEM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-107 | 55 |
