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Name : AGROH133_14862 (AGROH133_14862) Accession : YP_004280507.1 Strain : Genome accession: NC_015184 Putative virulence/resistance : Unknown Product : oligopeptide ABC transporter ATPase/substrate-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 381307 - 383031 bp Length : 1725 bp Strand : + Note : ABC transporter nickel_nikD: nickel import ATP-binding protein NikD; ATPase components of various ABC-type transporters, contain duplicated ATPase DNA sequence : ATGAGCGATATTCTCTCCATGAAGCCAGACCGACCGCTGCTTGACGTCCGCAATCTGGTCACCGAATTTACCGTGCGAAA CGGCATTTTCCGCGCGGTAAACGATCTGTCTTTTTCCATCGATCCCGGCAAGACGCTCTGCGTTGTGGGCGAAAGCGGTT CCGGCAAATCCGTCACCGCCCGCTCGATCCTGCAGATCATCGACAGCCCCGGTTACATCGCTTCCGGGTCGATCATCCTC AACCGTGCCGACGGCACGTCGCTGGATCTCGCAAAGCTCGATCCGCGCAGCCGGGCCATCCGCTCGGTGCGCGGCGCAGA TATCGCGATGATTTTTCAGGAGCCGATGTCGTCGCTGTCGCCGGTGCATACCGTCGGTGATCAGATCACCGAAGTTCTGC GGCTGCACTTGAAGATGAGCAAGGCGCAGGCACGGGCGGAAGCCATCGAGCTGCTGCGACAGGTGGAAATTCCCAACCCC GAAAAGGCGCTGGATCGTTATGCCTTCCAATATTCCGGCGGCATGCGCCAGCGCGCCATGATCGCCATGGCGCTGGCCTG CAAACCGCAACTGTTGATCGCCGACGAACCGACAACCGCGCTGGACGTCACGACGCAGGCCGAAATCCTCGACCTGATAT CGCGGCTGCAAAAGGCGCATGGCATGGCGGTGCTGTTCATCACCCACGACATGGGCGTGGTGGCGCAGATTGCCGATGAC GTGCTGGTCATGCATCACGGCGTCGCCAAGGAATATGGCACTGTCGATGAGATATTCCACAATCCACAAGACCCCTATAC GCGCATGCTGATCGGCTCGGTTCTGAAGCTGGAGCAGAAGGCGGAAATCCGGCTTGCCCGCCCGCCGCTCGATCTTGCCG CGGCGCCTATCCTAGAAGTGAACGACCTCTCGATGCACTTCGGTGAGATGAAGGCGCTGGATGGCGTGTCGATCAAGCTG CTTCCGGGCGAAACGCTCGGCATCGTCGGCGAAAGCGGCTCCGGCAAGACAACCATGGGCCGCTCGATCATGCGCCTCTA CGATCCGACCGGGGGCGAGATGCGCTATCGCCGGGCGGATGGCACGGTGGTCGATCTTGCCAAAATCGAAGGTGCGGAGC TGAAAGCGGCGCGGCGTGAGTTGCGCATGGTTTTTCAGGATCCGTTCGGTTCGCTCAATCCGCGCATGACGGTGGCACAG GTCATCGGCGAGCCGCTGCTGGTCAACGGCATTGCGAAAGGCAAGGAACTGGATGAGCGCGTCTGCGCCCTGATGGAGCA GGTGGGTCTGGACCCGGCCGGACGTGAGCGTTACCCACACGCCTTTTCCGGCGGCCAGCGCCAGCGCATCGGTATCGCCC GCGCCATCACGCTCCGGCCGCGTATCATCGTTGCGGATGAGGCGACATCGGCGCTCGATGTTTCGGTGCGTTTCCAGGTG CTGGACCTGCTCATGCGGCTGCAGGACGAACTTGGCCTGGCTTACATCTTCATCAGCCATGACATCGGCGTCATCAGATA CATGTGCGACCGCGTCGGAGTGATGTATCGCGGCAAGCTTGTTGAGGTGGGAGACGCCGAAAAAGTCTGCAATGCGCCGG ATCACCCTTATACGCAGGCACTTCTGTCGGCCATTCCGCGCCCGGATCCGCGCGACCGCGACCGCACGAGAAGGTTCCGC TACGTCGAGCCGCCCGAGATCAAGAACGGAGCTGCTGCCAGATAA Protein sequence : MSDILSMKPDRPLLDVRNLVTEFTVRNGIFRAVNDLSFSIDPGKTLCVVGESGSGKSVTARSILQIIDSPGYIASGSIIL NRADGTSLDLAKLDPRSRAIRSVRGADIAMIFQEPMSSLSPVHTVGDQITEVLRLHLKMSKAQARAEAIELLRQVEIPNP EKALDRYAFQYSGGMRQRAMIAMALACKPQLLIADEPTTALDVTTQAEILDLISRLQKAHGMAVLFITHDMGVVAQIADD VLVMHHGVAKEYGTVDEIFHNPQDPYTRMLIGSVLKLEQKAEIRLARPPLDLAAAPILEVNDLSMHFGEMKALDGVSIKL LPGETLGIVGESGSGKTTMGRSIMRLYDPTGGEMRYRRADGTVVDLAKIEGAELKAARRELRMVFQDPFGSLNPRMTVAQ VIGEPLLVNGIAKGKELDERVCALMEQVGLDPAGRERYPHAFSGGQRQRIGIARAITLRPRIIVADEATSALDVSVRFQV LDLLMRLQDELGLAYIFISHDIGVIRYMCDRVGVMYRGKLVEVGDAEKVCNAPDHPYTQALLSAIPRPDPRDRDRTRRFR YVEPPEIKNGAAAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-76 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-76 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-76 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-76 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 8e-94 | 41 |
