Gene Information

Name : AGROH133_14809 (AGROH133_14809)
Accession : YP_004280480.1
Strain :
Genome accession: NC_015184
Putative virulence/resistance : Virulence
Product : type IV secretion protein AvhB10
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG2948
EC number : -
Position : 356271 - 357443 bp
Length : 1173 bp
Strand : +
Note : Bacterial conjugation TrbI-like protein; type IV secretory pathway, VirB10 components

DNA sequence :
ATGGCTCAGGAAGACGAGGATCGCATCCCCGGAGAGCGTGCCGAAACCGTCACCAGTCGTCAGATCGACAACAGCCCTCT
CTTGAAACGCGGCGCTGTTGCCATTGCGATCATCGCGTTTGTCAGCTTCGCGCTTTGGTCGACGACGGGAAAGAAGGGAA
GGGATGAAAATCTTCAGCCCGAACGGATCATTATTCGTCAGACGACCCCCTTCGAGGCCGCAAAAGAGAAAGTTGAACCG
GACCAGGCGCTCCCTGAAGTAAAATTGCCAACGCCTGTCGTCGAACCGGTCATTGAAGAGCAGGATAAGCTGCTCGATTC
CGCCCGCCGCGCGCCCGTGATGGCCTTCAGTGGAGGGCAGAGGAATCGGAAAGAGCTGAGGGAAAGCGACAGCTCTTATC
CTTCCGACAACAGCAATTTCGTGCCGCTCGACAACAATATGTCTGTTCAGAACCAGCAAAACAATGAGCAGCAGCGTTTC
GATGGCCTGCTGCGGCCAACGCGGCTTGAAGGCTCAAGGGCCGGTACACTCGGAAACCGCAATTTCATCGTCGCGATGGG
AACGTCCATTCCCTGCGTTCTTGAAACCGCGTTAGCATCCGACCAGCCGGGATTTACCACTTGTGTGATCAACCGCGATG
TTCTCTCTGACAATGGCAGGGTGGTCTTGATGGAAAAGGGCACGCAGGTTGTCGGCGAATATCGTGGAGGGCTTCAACGC
GGGCAAAAGCGCCTGTTCATTCTCTGGAATCGCGCGAAAACGCCGAAGGGCGTTGTCGTCACTCTCGCATCACCAGCAAC
CGACGCACTTGGTCGTGCCGGTGTCGACGGCCATGTCGACACCCATTGGTGGGAGCGGTTCGGCAGCGCTCTTCTGCTTT
CCATTCTCGGGGACGCGACGAACTATGCAAGCAGTCGGCTGCAGGACAGCGATGTCGACGCGCAAAAAACAACGAGTGCC
AGTCAACAGGCGGCCGCCATCGCGGTCGAGCAGTCCATCAATATCCCGCCGACACTCAATAAGCACCAAGGTGAACCGGT
TTCGATCTTTGTCGCTCGCGATCTCGACTTTTCCGGCATCTACGGTCTTCGGGTGACCGAACCCAGAAACCGCGTTTTCG
ATCGTGCAGTCCTGGGGGATTTCGCGCCACGATCGACGCTCCTAACGAAATAG

Protein sequence :
MAQEDEDRIPGERAETVTSRQIDNSPLLKRGAVAIAIIAFVSFALWSTTGKKGRDENLQPERIIIRQTTPFEAAKEKVEP
DQALPEVKLPTPVVEPVIEEQDKLLDSARRAPVMAFSGGQRNRKELRESDSSYPSDNSNFVPLDNNMSVQNQQNNEQQRF
DGLLRPTRLEGSRAGTLGNRNFIVAMGTSIPCVLETALASDQPGFTTCVINRDVLSDNGRVVLMEKGTQVVGEYRGGLQR
GQKRLFILWNRAKTPKGVVVTLASPATDALGRAGVDGHVDTHWWERFGSALLLSILGDATNYASSRLQDSDVDAQKTTSA
SQQAAAIAVEQSINIPPTLNKHQGEPVSIFVARDLDFSGIYGLRVTEPRNRVFDRAVLGDFAPRSTLLTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vblB10 YP_001610350.1 VblB10 protein Virulence Not named Protein 1e-71 53
virB10 YP_001610006.1 VirB10 protein Virulence Not named Protein 8e-82 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AGROH133_14809 YP_004280480.1 type IV secretion protein AvhB10 VFG2239 Protein 2e-78 51