Gene Information

Name : AGROH133_14805 (AGROH133_14805)
Accession : YP_004280478.1
Strain :
Genome accession: NC_015184
Putative virulence/resistance : Virulence
Product : type IV secretion protein AvhB8
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3736
EC number : -
Position : 354734 - 355405 bp
Length : 672 bp
Strand : +
Note : VirB8 protein; type IV secretory pathway, component VirB8

DNA sequence :
ATGGTGACGACAGATAATCTCAAGAGCTACTTCGACAAAGCACGTCGTTTCGACCAGGACCGGATGATCCAGGTCGAGCG
ATCGAACAGGATTGCCTGGTCGATCGCCATAGTTTCAGGCATTGTCGCCGCTGTAGCCGTCTTCGCGGTCGCGTGTCTCA
CACCCCTCAAGACGGTTGAACCCTTTGTGGTGCGCGTCGACAATTCGACCGGCATTGTCGACGTCGTGTCAGCGCTGACA
TCGACGGCTGGCACCTACGATGAAGCGGTGACGAAATATTTCGCTGCAAAATATGTCCGGGCCCGCGAGGGTTACGTCTG
GAGTGAAGCACAGGAAAATTTCCGCACCATCGCCCTCTTGTCGACGCAAGCGGAGCAAACGCGTTTCGCGGCCCTCTACC
GTGGCAGCAACCCGCAATCGCCCCAGAATACTTATGGTCGCGGGGCTACAGCAAGGATCGATATCGCTTCAATCTCCCTC
ATCAATCAGAATGTCGTTTCCGTACGCTACATGCGAACCATCACGCGTGGCGAGGAAGTACGAACGACCCATTGGGTTGC
GTCGATCACCTATTCCTACGCGAACGCTCCGATGTCCTCCACGGACCGGCTCGTAAACCCGCTCGGCTTTGTCGTCAGCG
AGTATCGCGCTGATCCGGAGGAGGTGAGATGA

Protein sequence :
MVTTDNLKSYFDKARRFDQDRMIQVERSNRIAWSIAIVSGIVAAVAVFAVACLTPLKTVEPFVVRVDNSTGIVDVVSALT
STAGTYDEAVTKYFAAKYVRAREGYVWSEAQENFRTIALLSTQAEQTRFAALYRGSNPQSPQNTYGRGATARIDIASISL
INQNVVSVRYMRTITRGEEVRTTHWVASITYSYANAPMSSTDRLVNPLGFVVSEYRADPEEVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vblB8 YP_001610348.1 VblB8 protein Virulence Not named Protein 2e-47 55
virB8 YP_001610004.1 VirB8 protein Virulence Not named Protein 4e-44 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AGROH133_14805 YP_004280478.1 type IV secretion protein AvhB8 VFG2237 Protein 4e-45 50