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Name : AGROH133_14794 (AGROH133_14794) Accession : YP_004280473.1 Strain : Genome accession: NC_015184 Putative virulence/resistance : Virulence Product : type IV secretion protein AvhB4 Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 350179 - 352560 bp Length : 2382 bp Strand : + Note : CagE, TrbE, VirB family, component of type IV transporter system; type IV secretory pathway, VirB4 components DNA sequence : TTGCCTGACATCGCCACCCTTAGATCACGCGAACTCACGCCAGAGGCTTTTATCCCTTACGTGCGGCACATCGACGAGAC GACAATCGCGCTCGAGTCCCGGACACTCATGGTCATGGTCGCGCTCGCAGGCGTATCGTTCGAAACTGCTGATCTGCTCG ACATCAACGCGCTCCATCGCGACCTCAACACGCTCTATCGAAATATTGCCGATGAGCGGCTCGCGATCTGGACCCATCTC ATTCGGCGCAGGGATAGCGACTATCCGGGCGGAACGTTCGCAACGCCATTCTCCGCCTCGCTCAACGAGAAATACCGGGA ACGCATGGCGCGCGAACACCTTTTCCGCAACGATCTCTATCTGACCGTCCTTTGGTCGCCAGCGCGTGGCCCTGCAGACA AGGCGGGGAAGCTGCTGTCGTACCTTCGACGGTCAAAACGACTCGATATGGAGCTGGATGAAGAGGCTCTGAAACAGCTT AAGGACAAAGTCGTCAACGTAGTGGCGGGCTTGAGGCGCTTTGAGCCACGGGTCCTTTCTCTTTACGAACAGGAAGGCAT GCTCTTCTCTGAACCGAGCGAGGTGCTGCACCAGCTCGTCGGCGGGAGGCGTGAGCGTGTGCCGCTTACCGAAGGTCGCG TCGCCTCGGCAATTTACTCTGATCGCGTAATCATAGGTCGGGAAACGATCGAGATCCGGCATGAGGCAGAAAGCCGCTTT GCCGGCATGCTGAGCTTCAAGGAATATCCAGCCCGCACCAGGACAGGCATGCTGGACGGAGTTCTAAATAGTCCGTTTGA GCTCATTCTCTCACAGTCGTTCTGCTTTGTGTCGAAGGCGGACGCTCGCGTCATCATGGGGCGTAAGCAAAACCAGTTGG TGAGCAGCGGCGACAAGGCGGCTTCGCAAATCGATGAACTTGACGATGCGATGGACGACCTGGAGTCCAACCGCTTCGTG ATCGGCGAGCATCACCTGACACTCTCCGTCTTTGCGACCACGTTAAAGGAATTAACCGACAATCTGGCAAAGGTTCGCGC CAGCCTGACCAATGGCGGGGCTGTCGTTGCGCGCGAGGATCTTGGTCTCGAAGCGGCATGGTGGGCGCAACTTCCGGGCA ATTTTCGTTACCGCGCGCGCTCAGGCGCGATCAGCTCGAAGAATTTCGCAGCATTGTCACCGTTCCATTCCTATCCGATC GGACAGAAGGACGGCAATGAGTGGGGACCCGCCGTCGCCCTGCTCAAGACCGCTTCAGGCTCGCCCTACTACTTCAATCT CCATTATGGCGATCTGGGCAACACCTTCATGTGCGGTCCGTCGGGAGCGGGCAAAACCGTGATTGTCAATTTCATGCTGT CACAGCTCGAGAAACACGACCCGCACGTGGTGTTCTTCGACAAGGATCGCGGCGCGGACCTTTATGTTCGCGCCGCCGGA GGCACCTACCTGCCGCTGAAGAACGGGGTCCCCACCGGCTGCGCTCCCTTAAAGGCCCTCAACCTGACGCCGGAGAACAA GGTGTTCCTGGCGCGCTGGATCGGCAAGCTTGTGGGTTCAGGGGCGCGGGAACTGACTGTCACCGAACTTCGCGACATCT CCGGCGCGATCGACGGCCTTGCCGACCTGCCCGCTGAGCGACGGACAATAGGGGCGCTGCGGGCTTTCCTCAACAATACG GATCCGGAAGGTATCGCGGCGAGGCTCCGCCGGTGGGAGGAGGGAGGGCCGCTCGGCTGGGTCTTCGACAATGTCATCGA AGATATCGGATTTGGGGATTTCGGCGGATCAGGGAAGTTCATCGGCTACGACATGACCGACTTCCTCGACAACGAGGAAA TTCGCACACCGCTGATGGCCTATCTCTTCCATCGCGTCGAGCAGATGATCGATGGCCGCCGGATCATCATCGTCATCGAC GAATTCTGGAAGGCGCTACAGGACGAGGGGTTCCGCGATCTTGCGCAAAACAAGCTGAAGACCATCCGCAAACAAAATGG GTTGATGCTGTTTGCCACGCAAAGCCCGCGCGACGCGCTGAACTCGCCAATCGCGCACACGATCATCGAGCAATGCCCGA CACAGATCTTCCTGCCCAACTCGCGCGGCAACCATGCCGACTATGTCGATGGATTCAAGCTCACCGAGCGCGAATACGAA TTGATAGCGCGCGAGCTTTCCGTTGAAAGCCGGAGGTTCGTGTTGAAGCAAGGACACAACAGCGTCGTTGCCGAGCTCGA TCTCAACGGCTTCGATGACGAGCTCGCCATCCTCTCCGGCCGGACCGCCAATGTCGAACTTCTCGACGCGATCCGCGCGG AGGTTGGAGACGACGTCGAGAACTGGCTTCCCATTTTCCAACAGCGAAGGAGTGCTAGCTGA Protein sequence : MPDIATLRSRELTPEAFIPYVRHIDETTIALESRTLMVMVALAGVSFETADLLDINALHRDLNTLYRNIADERLAIWTHL IRRRDSDYPGGTFATPFSASLNEKYRERMAREHLFRNDLYLTVLWSPARGPADKAGKLLSYLRRSKRLDMELDEEALKQL KDKVVNVVAGLRRFEPRVLSLYEQEGMLFSEPSEVLHQLVGGRRERVPLTEGRVASAIYSDRVIIGRETIEIRHEAESRF AGMLSFKEYPARTRTGMLDGVLNSPFELILSQSFCFVSKADARVIMGRKQNQLVSSGDKAASQIDELDDAMDDLESNRFV IGEHHLTLSVFATTLKELTDNLAKVRASLTNGGAVVAREDLGLEAAWWAQLPGNFRYRARSGAISSKNFAALSPFHSYPI GQKDGNEWGPAVALLKTASGSPYYFNLHYGDLGNTFMCGPSGAGKTVIVNFMLSQLEKHDPHVVFFDKDRGADLYVRAAG GTYLPLKNGVPTGCAPLKALNLTPENKVFLARWIGKLVGSGARELTVTELRDISGAIDGLADLPAERRTIGALRAFLNNT DPEGIAARLRRWEEGGPLGWVFDNVIEDIGFGDFGGSGKFIGYDMTDFLDNEEIRTPLMAYLFHRVEQMIDGRRIIIVID EFWKALQDEGFRDLAQNKLKTIRKQNGLMLFATQSPRDALNSPIAHTIIEQCPTQIFLPNSRGNHADYVDGFKLTEREYE LIARELSVESRRFVLKQGHNSVVAELDLNGFDDELAILSGRTANVELLDAIRAEVGDDVENWLPIFQQRRSAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB4 | YP_001610000.1 | VirB4 protein | Virulence | Not named | Protein | 0.0 | 62 |
| trwK | YP_001610476.1 | TrwK protein | Virulence | Not named | Protein | 1e-133 | 41 |
| trwK | CAD42844.1 | TrwK protein | Not tested | trw-PAI | Protein | 9e-134 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AGROH133_14794 | YP_004280473.1 | type IV secretion protein AvhB4 | VFG2233 | Protein | 0.0 | 62 |
