Gene Information

Name : AGROH133_14721 (AGROH133_14721)
Accession : YP_004280439.1
Strain :
Genome accession: NC_015184
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase/substrate-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 321954 - 322712 bp
Length : 759 bp
Strand : +
Note : ABC transporter; ABC-type antimicrobial peptide transporter, ATPase component

DNA sequence : 
GTGCGGTCGTTTAGGCTGCGCGTCGAATATCGGTATCTAAACCGGTTGAGATCCGCCAGCATATCGGTCCATATAGGACG
AAGCAGAGATCGAAGAGCCATGGTCCTTTCACTTTCCGGCATCAAGAAATCCTACCAGACAGCCGAAGGCATTATCCCGG
TCCTGAACGGCGTCGACCTTTCACTTGAAGCCGGCGAAAGTCTTGCCCTGACGGGGGAATCCGGCAGCGGAAAGAGTACG
CTTTTGCATCTGGCCGGCGGCCTTGATTTGCCCGACAGTGGCATCATCACGGTGAGGGGTCGGAAAATAACCGATCTCGA
CGAGGCCGGTCGAGCGAGCTTCCGACGCCGGGAGGTGGGCTTAATCTTCCAGCAGTTCAATCTCATTCCGAGCCTCGATG
TCGGATCCAATATCTCGTTTCACGCCCGGCTGGCGGGCCGTTTCGACCCGGTCTGGGAAAAAAGCCTGGTCGAGGCGCTG
GGGATCGGAGAGCTGCTTGCACGCTATCCCGAACAGCTCTCCGGCGGTCAGCAGCAAAGGGTGGCGATCGGACGTACGCT
TGCGGCAAGACCGCCCCTCATTCTTGCCGATGAGCCGACAGGTAATCTCGACGAGGCGACGGCTGATATCGTCATCGATA
TTATGTTGAGACTGACAAAGTCCGCGCAGATCACACTCCTCCTGGTGACCCATTCCAGCCGGCTGGCGGTAAAACTCGAT
CGGCGTATCGCGCTGAGCGGCGGGAAGGTTTCGCAATGA

Protein sequence : 
MRSFRLRVEYRYLNRLRSASISVHIGRSRDRRAMVLSLSGIKKSYQTAEGIIPVLNGVDLSLEAGESLALTGESGSGKST
LLHLAGGLDLPDSGIITVRGRKITDLDEAGRASFRRREVGLIFQQFNLIPSLDVGSNISFHARLAGRFDPVWEKSLVEAL
GIGELLARYPEQLSGGQQQRVAIGRTLAARPPLILADEPTGNLDEATADIVIDIMLRLTKSAQITLLLVTHSSRLAVKLD
RRIALSGGKVSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AGROH133_14721 YP_004280439.1 peptide ABC transporter ATPase/substrate-binding protein CP001581.1.gene798.p Protein 2e-38 44
AGROH133_14721 YP_004280439.1 peptide ABC transporter ATPase/substrate-binding protein CP001581.1.gene598.p Protein 3e-36 42