Gene Information

Name : nrdE (AGROH133_02899)
Accession : YP_004277380.1
Strain :
Genome accession: NC_015183
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 71899 - 74088 bp
Length : 2190 bp
Strand : +
Note : Catalyzes the rate-limiting step in dNTP synthesis; Ribonucleotide reductase, subunit alpha

DNA sequence :
TTGGACACGCTGACCTCGAGCGCGTTGCGCAACACGGATGCCAAACAACAAGTAACCGCTGCGCAGAAACACCTGGACGC
GGGACTGGACTATCACGCGCTGAACGCGATGCTGAACCTCTACGATGAAAACGGGAAGATCCAGCTCGACAAGGACCGCC
TTGCGGCACGGCAATATTTCCTTCAGCACGTCAACCAGAACACGGTGTTTTTCCATAATCTCAGGGAAAAGCTCGATTAT
CTCGTGACCGAGGGATATTACGAACAGGAGGTGCTGGACCAGTATTCCTTCAATTTCGTCCGTGACCTCTACGACGAGGC
CTATGCCAGAAAGTTCCGTTTTCCGACATTTCTCGGCGCCTTCAAATATTATACGTCCTATACGCTGAAGACCTTCGACG
GAAAGCGTTACCTGGAGCGTTATGAGGACCGCGTCTGTATGGTGGCGCTGGCTCTGGCGCGTGGCGACGAGCAACTTGCC
CGCGATCTGATGGATGAAATCATTTCCGGCCGCTTCCAGCCGGCAACCCCGACCTTTCTCAACGCCGGCAAGAAAAGCCG
CGGTGAGCTGGTTTCGTGTTTTCTGCTGCGTGTGGAAGACAATATGGAAAGCATCGGCCGGTCCATCAATTCAGCATTGC
AGCTTTCCAAGCGTGGCGGTGGCGTAGCACTGTCCCTGACCAATATTCGCGAAGCCGGCGCGCCGATCAAACAGATCGAA
AACCAGTCCTCCGGCGTGATTCCTGTCATGAAGCTGCTGGAAGATTCGTTCTCCTACGCCAACCAGCTTGGCGCGCGCCA
GGGCGCTGGCGCGGTCTATCTGCATGCCCACCACCCCGACATCATGCGTTTCCTCGATACCAAGCGCGAAAACGCCGACG
AAAAAATCCGCATCAAGACCCTTTCGCTCGGCGTAGTGATCCCTGATATCACCTTCGAACTCGCGAGAAACAACGAGGAT
ATGTACCTGTTCTCGCCGTATGATGTTGAGCGGGTCTATGGCGTGCCGTTCACCGAGATTTCCGTCAGCGAAAAATATCA
GGAAATGGTCGCCGACAGTCGCATCCGCAAGAAGAAGATCAAGGCACGCGAGTTCTTCCAAGTCATCGCAGAAATCCAGT
TCGAAAGCGGTTATCCCTATATCATGTTCGAGGATACGGTTAACCGCGCCAATCCAATCGCCGGCCGTATCAGCATGAGC
AATCTCTGCTCGGAAATTCTACAGGTCAGCGAGGCGAGCGAATTCAACGACGATCTCTCTTACAGCCATATGGGCAAGGA
TATTTCCTGCAATCTCGGCTCGCTCAACATTGCTTCAGCAATGGATTCGGCTGATTTCGGCAAGACGATCGAAACCTCCA
TCCGGGCGCTGACGGCCGTTTCTGACATGAGCCACATCTCGTCTGTCCCTTCCGTGGAAAAGGGCAATGATGCGAGCCAC
GCCATCGGGCTTGGTCAGATGAACCTGCATGGCTATCTGGCGCGCGAGCGCATCTTCTACGGCTCCGAAGAGGGCATCGA
TTTCACCAATATCTATTTCTACACGGTGACCTATCACGCCATCCGCGCCAGCAATCGCCTAGCCACTGAAAGGGGCCAGA
GCTTCAAGGGCTTTGAAAACTCCAAATATGCCTCGGGCGACTACTTCGATAAATATACCGACCGGGAATGGCTGCCCGCG
ACGGAAAAGGTCCGCGACCTTTTTGAGAAAGCCGGCATTTCCATTCCGACACAGGAGGACTGGAAAGCGTTGAAGCAGGC
CGTCATGGAGACCGGCCTCTATAACCAGAACCTTCAGGCCGTGCCGCCCACAGGCTCGATCTCCTATATCAACCACTCGA
CCTCCTCGATCCATCCCATCGTCTCGAAGATTGAAATTCGCAAGGAAGGCAAGATCGGCCGTGTTTATTATCCGGCTTCC
TACCTTTCGAACGACAATCTCGAATATTATCAGGATGCCTACGAAATCGGTCCGGAAAAGATCATAGATACCTATGCGGC
GGCCACTCAGCATGTCGATCAGGGCCTGTCGCTGACACTGTTCTTCCGCGATACGGCAACGACGCGCGATATCAACCGGG
CGCAGATCTACGCCTGGAAAAAAGGCATCAAGACCATCTACTACATCCGTTTGCGCCAGATGGCGCTGGAAGGCACGCAG
GTTCAGGGCTGCGTATCCTGCACGCTCTGA

Protein sequence :
MDTLTSSALRNTDAKQQVTAAQKHLDAGLDYHALNAMLNLYDENGKIQLDKDRLAARQYFLQHVNQNTVFFHNLREKLDY
LVTEGYYEQEVLDQYSFNFVRDLYDEAYARKFRFPTFLGAFKYYTSYTLKTFDGKRYLERYEDRVCMVALALARGDEQLA
RDLMDEIISGRFQPATPTFLNAGKKSRGELVSCFLLRVEDNMESIGRSINSALQLSKRGGGVALSLTNIREAGAPIKQIE
NQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIMRFLDTKRENADEKIRIKTLSLGVVIPDITFELARNNED
MYLFSPYDVERVYGVPFTEISVSEKYQEMVADSRIRKKKIKAREFFQVIAEIQFESGYPYIMFEDTVNRANPIAGRISMS
NLCSEILQVSEASEFNDDLSYSHMGKDISCNLGSLNIASAMDSADFGKTIETSIRALTAVSDMSHISSVPSVEKGNDASH
AIGLGQMNLHGYLARERIFYGSEEGIDFTNIYFYTVTYHAIRASNRLATERGQSFKGFENSKYASGDYFDKYTDREWLPA
TEKVRDLFEKAGISIPTQEDWKALKQAVMETGLYNQNLQAVPPTGSISYINHSTSSIHPIVSKIEIRKEGKIGRVYYPAS
YLSNDNLEYYQDAYEIGPEKIIDTYAAATQHVDQGLSLTLFFRDTATTRDINRAQIYAWKKGIKTIYYIRLRQMALEGTQ
VQGCVSCTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 77