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Name : AGROH133_09138 (AGROH133_09138) Accession : YP_004279977.1 Strain : Genome accession: NC_015183 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 2721511 - 2722851 bp Length : 1341 bp Strand : + Note : TRAP C4-dicarboxylate transport system permease DctM subunit, DctM-like transporters; TRAP-type C4-dicarboxylate transport system, large permease component DNA sequence : ATGAAATCGCCCAGTTCGCCGGCGAGAACCTCACGATCGAACAGCTTTCGGAGCGCTGATACCATGACACTTTTCGTTTT TGTCGGCTCTCTTCTCGGAGCCATGGCGATTGGCGTTCCCGTCGCTTTCTCGCTGATGTTCTGTGGCGTCGTGCTCATGT GGTACATGGGCATGTTCAACACCGCGATCATCGCCCAGAACATGATTTCAGGCGCGGACACCTTCACGCTCCTCGCCATC CCCTTCTTCATTCTGGCTGGCGAACTGATGAACTCCGGTGGTCTTTCCCGCCGCATCATCGACTTTGCGATTGCGCTTGT GGGCCATATCAGGGGCGGTCTCGGCATCGTGGCGATTGTCGCGGCCATCATCATGGCCAGCATCTCCGGTTCGGCCGCTG CCGACACCGCAGCCCTTGCCGCAATCCTTATCCCGATGATGGCGAAAGCCGGTTACAACATTCCGCGCTCCGGCGGCCTC ATCGCTGCAGGCGGCATCATTGCCCCGGTCATTCCGCCCTCCATGGCCTTCATCGTCTTCGGCGTCGCCGCCAACGTTTC GATCACCCAGCTTTTCCTTGCCGGTATCGTACCCGGCATTCTGATGGGCATTTCGCTGATCATCGCCTGGCTGATCGTGG TCCGAAAGGATAACATCAAGCCGCTGCCCAAGACCTCGGGCAAGGAACGTCTGGTTGCCACGGTCCGCGCCGGCTGGGCG CTTGGCATGCCGGTCATCATTCTGGGCGGCATCAAGGCAGGCATCATGACGCCGACGGAAGCCGCCGTTGTCGCTGCCGG CTACGCTCTTTTCGTCGGCATGGTGATCTACCGCGAACTGAAGCCGGCGGATCTGTTCCACGTTCTTCTGCGCGCTGCCA AGAGCACCTCGATCATCATGTTCCTTGTCTGCGCAGCCCTCGTCTCCGCATGGCTCATCACGGCTGCGAACATTCCAAAC GAGGTCGCCGGTTATATCGAACCGCTGATCGATCGTCCGATGCTTCTGATGGTTGCCATGATGGTGCTGGTCTTCATCGT AGGAACCGCGCTCGACCTGACACCGACCATCCTGATCCTGACGCCCGTTCTGATGCCAATCGTCAAGCAGGCAGGCATCG ACCCGGTCTATTTCGGCGTCCTCTTCATCATCAACAATGCCATCGGCCTGATTACCCCGCCGGTCGGCGTCGTACTAAAC GTCGTCTCAGGCGTCGGACGCATCCCGCTCGGCAAGGTCACGATCGGTGTCTGGCCTTTCCTCGTTGCAGAAACCATCGT TCTGGCGTTGCTCGTGGTTTTCCCGGACATCGTGATGGTTCCGCTGCAGTACCTTCGTTAA Protein sequence : MKSPSSPARTSRSNSFRSADTMTLFVFVGSLLGAMAIGVPVAFSLMFCGVVLMWYMGMFNTAIIAQNMISGADTFTLLAI PFFILAGELMNSGGLSRRIIDFAIALVGHIRGGLGIVAIVAAIIMASISGSAAADTAALAAILIPMMAKAGYNIPRSGGL IAAGGIIAPVIPPSMAFIVFGVAANVSITQLFLAGIVPGILMGISLIIAWLIVVRKDNIKPLPKTSGKERLVATVRAGWA LGMPVIILGGIKAGIMTPTEAAVVAAGYALFVGMVIYRELKPADLFHVLLRAAKSTSIIMFLVCAALVSAWLITAANIPN EVAGYIEPLIDRPMLLMVAMMVLVFIVGTALDLTPTILILTPVLMPIVKQAGIDPVYFGVLFIINNAIGLITPPVGVVLN VVSGVGRIPLGKVTIGVWPFLVAETIVLALLVVFPDIVMVPLQYLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 5e-39 | 42 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 5e-39 | 42 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 4e-39 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AGROH133_09138 | YP_004279977.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 2e-39 | 42 |
