Gene Information

Name : AGROH133_08951 (AGROH133_08951)
Accession : YP_004279914.1
Strain :
Genome accession: NC_015183
Putative virulence/resistance : Resistance
Product : ABC transporter nucleotide-binding protein/ATPase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : 3.6.3.25
Position : 2642665 - 2643375 bp
Length : 711 bp
Strand : +
Note : ABC transporter nucleotide-binding protein/ATPase; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component

DNA sequence : 
GTGACGAAAAGCATCATAGAGCTTAAGAAGGCCGACCTAACGCTCGGCAACGCCGCCGCCTCCGTTCACGTTCTCAAGAG
CATCGATCTTGCCATTGGCGAAAGCGAGGCGGTGGGCATCGTCGGCCCTTCCGGTTCGGGAAAATCGACGCTTCTAATGG
TGCTTGCCGGTCTCGAAAGGCTGGATAGCGGCGAGATCGTCATAGCGGGCACGGAATTGCATAAGCTCGGCGAGGATGCT
CTCGCGGATTTCCGCGGCAAGAATATCGGCATCGTTTTCCAGTCTTTCCACCTCATCGCCAATATGACGGCGCTGGAAAA
CGTAGCCGTTCCGCTGGAACTGGCCAACGTGCCTAACCCCTTCGAGATCGCCAAACGGGAACTCGTTGCTGTCGGTCTCG
GCGAACGCCTCAACCATTATCCCGGCCAGCTCTCCGGTGGCGAACAGCAGCGTGTTGCGATCGCCCGCGCGCTTGCACCC
TCCCCCGCCGTGTTGATCGCAGACGAACCGACCGGCAATCTGGATGCGGATACGGGCCAGCAGATCGCCGATCTTCTTTT
CTCAAAACAGGCCGAACGCGGCATGACGATGATCCTTGTCACCCATGATCCGTCACTGGCCGCCCGTTGCTCAAGGCAGA
TCAAGGTGCGCTCCGGCGAGATAGAGGGTGACAGCGCCACTGCCCATATGGCCCGGGCGGTATCGGCATGA

Protein sequence : 
MTKSIIELKKADLTLGNAAASVHVLKSIDLAIGESEAVGIVGPSGSGKSTLLMVLAGLERLDSGEIVIAGTELHKLGEDA
LADFRGKNIGIVFQSFHLIANMTALENVAVPLELANVPNPFEIAKRELVAVGLGERLNHYPGQLSGGEQQRVAIARALAP
SPAVLIADEPTGNLDADTGQQIADLLFSKQAERGMTMILVTHDPSLAARCSRQIKVRSGEIEGDSATAHMARAVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-28 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AGROH133_08951 YP_004279914.1 ABC transporter nucleotide-binding protein/ATPase NC_012469.1.7686878. Protein 1e-40 47
AGROH133_08951 YP_004279914.1 ABC transporter nucleotide-binding protein/ATPase NC_008702.1.4606598. Protein 7e-35 46
AGROH133_08951 YP_004279914.1 ABC transporter nucleotide-binding protein/ATPase CP001581.1.gene798.p Protein 1e-34 41
AGROH133_08951 YP_004279914.1 ABC transporter nucleotide-binding protein/ATPase NC_012469.1.7685735. Protein 8e-34 41