Gene Information

Name : AGROH133_03183 (AGROH133_03183)
Accession : YP_004277495.1
Strain :
Genome accession: NC_015183
Putative virulence/resistance : Unknown
Product : peptide ABC transporter ATPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 193337 - 194977 bp
Length : 1641 bp
Strand : +
Note : ABC transporter nucleotide-binding protein/ATPase (peptide); ABC-type uncharacterized transport system, duplicated ATPase component

DNA sequence :
ATGATGGAAACAAAGACCCAGCCGCTTCTCTCCGTCCGTGATCTCTCCGTTGCCTTTCATCAGGGTGGAGCGACCAGCAT
CGCCGTAGATCATGTTTCCTTCGACCTGATGCCGGGCGAAGTTGTCGCCCTGGTAGGGGAATCCGGCTCCGGAAAATCGG
TCACGGCGAACTCCATTCTCAAATTGCTGCCCTATCCGGCGGCGAGCCATCCTTCGGGCAAAATCCTGTTCGACGGCAAG
GATATGCTGACCCTGCCGGAACGCGCGTTGCGCGCTGTTCGCGGCAACGACATCACCATGATTTTCCAGGAGCCGATGAC
CTCGCTCAACCCGCTCCACACCATCGAGCGGCAGATCGGCGAGATTCTGGAGCTGCATCAGGCAATCACCGGCGCTGAAG
CGCGGGCGCGCACGCTGGAACTGTTATTACAGGTGGGTATCCGCGAGCCGGAAAAGCGCCTGAAGGCTTATCCGCATGAA
TTGTCCGGCGGCCAGCGGCAGCGCGTGATGATCGCCATGGCGCTTGCCAACCGGCCGAAACTGCTGATCGCAGATGAACC
CACGACCGCACTCGATGTAACCGTTCAGGCGCAGATCCTTGAACTGCTGAGCGACCTCAAAAACCGGCACGGCATGTCCA
TGCTGTTCATCACCCACGATCTCGGCATTGTCCGTAAGTTTGCCGATCGTGTCTGCGTGATGACCAAGGGAAAGATCGTC
GAGACCGGCACGGTGGAACAGGTGTTTACCGATCCGCAGCATGCCTATACCCGCCATCTTCTGGCTGCCGAACCCAAGGG
CGAGCCGCCGCTTTCCGATGCCAGCAAACCTGTCGTCATGCAGGGCGACGACATAAAAGTCTGGTTCCCGATCAAGGCGG
GGCTGATGCGCAAGGTGTTCGACCACGTGAAGGCGGTTGACGGTATCGATATTACCCTGCGCGCAGGACAGACGGTTGGC
GTCGTGGGCGAATCCGGCTCCGGCAAAACGACACTCGGTCTCGCCCTATCGCGTCTTATAGCGTCTGAGGGGCGTATCAG
TTTCATCGGTCAGTCGATCGACAGCTATTCCTATGAAATGATGAAGCCGCTCAGAAATCGGCTTCAGGTGGTGTTTCAGG
ATCCTTACGGTTCGCTCAGCCCACGCATGTCGGTGGGCGAAATCGTTGCCGAGGGTCTGAAGGTGCACGAGCGACAGCTT
TCCGCCGATGAGCGGGATACCCGCGTCGCCCAGGCGCTGGAAGAAGTCGGGCTCGACCCGGCGACGCGCTGGCGCTATCC
GCATGAATTTTCCGGTGGTCAGCGTCAGCGTATCGCCATTGCCCGCGCCATGGTGTTGAAACCTCGCTTCGTCATGTTGG
ACGAGCCCACATCGGCGCTCGACATGAGCGTGCAGGCACAGGTGGTCGATCTCTTGCGCGATCTTCAGGCCCGCCACGAA
CTCGCCTATCTCTTCATCAGTCATGACCTGAAGGTAGTTAAAGCGCTTGCCAACGACGTAATCGTCATGCGCAACGGCAA
GGTGGTGGAGAGCGGCCCGGCAGCGGAGATATTCGCCGATCCGCAACAGGAATACACCAAGGCCCTGCTGGCTGCTGCTT
TCAATATCGAGGCAGTCGAAACTAAAGCGGTGAGCCAGTAG

Protein sequence :
MMETKTQPLLSVRDLSVAFHQGGATSIAVDHVSFDLMPGEVVALVGESGSGKSVTANSILKLLPYPAASHPSGKILFDGK
DMLTLPERALRAVRGNDITMIFQEPMTSLNPLHTIERQIGEILELHQAITGAEARARTLELLLQVGIREPEKRLKAYPHE
LSGGQRQRVMIAMALANRPKLLIADEPTTALDVTVQAQILELLSDLKNRHGMSMLFITHDLGIVRKFADRVCVMTKGKIV
ETGTVEQVFTDPQHAYTRHLLAAEPKGEPPLSDASKPVVMQGDDIKVWFPIKAGLMRKVFDHVKAVDGIDITLRAGQTVG
VVGESGSGKTTLGLALSRLIASEGRISFIGQSIDSYSYEMMKPLRNRLQVVFQDPYGSLSPRMSVGEIVAEGLKVHERQL
SADERDTRVAQALEEVGLDPATRWRYPHEFSGGQRQRIAIARAMVLKPRFVMLDEPTSALDMSVQAQVVDLLRDLQARHE
LAYLFISHDLKVVKALANDVIVMRNGKVVESGPAAEIFADPQQEYTKALLAAAFNIEAVETKAVSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-85 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-85 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-85 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-85 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-101 42