Gene Information

Name : glnA (AGROH133_06747)
Accession : YP_004279019.1
Strain :
Genome accession: NC_015183
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1715600 - 1717009 bp
Length : 1410 bp
Strand : +
Note : Glutamine synthetase type I, catalytic domain

DNA sequence :
ATGACGACCGCAAACGATATCTTGAAGCAGATCAAGGATAACGACATCAAGTTCGTGGACCTGCGCTTTACCGACCCCAA
GGGCAAGCTGCAGCATGTCACCATGGATGTTGTCTGCGTAGACGAAGACATGTTCGCCGATGGCGTCATGTTCGACGGCT
CCTCGATCGCCGGCTGGAAGGCCATCAACGAATCCGACATGGTGCTGATGCCCGATCCGGCAACTGCCCATACCGATCCG
TTCTTCGCCCAGTCGACCCTCGTCATCCTTTGCGACATTCTCGACCCGGTTTCCGGCGAAGCCTATAACCGCGACCCGCG
CGGCACCGCCAAGAAGGCCGAAGCCTACCTCAAGGCCTCCGGTATCGGCGACACCATCTTCGTTGGCCCCGAGCCAGAAT
TCTTCGTCTTTGACGACGTGAAGTACAAGGCAGACCCTTACAACACCGGCTTCAAGCTGGATTCATCGGAACTGCCGTCC
AACGACGACACGGATTACGAAACCGGCAACCTTGGCCACCGTCCGCGCGTCAAGGGCGGTTACTTCCCGGTTCCGCCGAT
CGACAGCCTGCAGGACATGCGTTCCGAAATGCTGACGGTTCTCGCTGAAATGGGCGTCGTCGTCGAAAAGCACCACCACG
AAGTCGCATCCGCGCAGCACGAGCTGGGCGTGAAGTTCGACACCATGGTATCCAGCGCCGACAAGATGCAGATCTACAAG
TACGTCGTGCACCAGGTCGCCAATGCCTATGGCAAAACGGCAACCTTCATGCCGAAGCCGATCTTCGGCGACAACGGCTC
GGGCATGCACGTGCACCAGTCGATCTGGAAGGGCGGCAAGCCGACCTTTGCTGGCGACGAATATGCCGGCCTGTCTGAAA
ACTGCCTGTACTACATCGGCGGCATCATCAAGCATGCCAAGGCCATCAACGCCTTTACCAACCCCACCACCAACTCCTAC
AAGCGTCTGGTACCGGGTTATGAAGCTCCGGTTCTGCTGGCCTATTCCGCCCGCAACCGCTCCGCATCGTGCCGCATTCC
CTTTGGCTCCAACCCGAAGGCAAAGCGCGTCGAAGTCCGCTTCCCGGACCCGACCCAGAACCCCTATCTCGGTTTTGCGG
CCATGCTGATGGCCGGCCTCGACGGCATCAAGAACAAGATCCATCCCGGCAAGCCGATGGACAAGGACCTTTACGACCTT
CCTGCCAAGGAACTGAAAAAGATCCCGACCGTCTGCGGCTCGCTGCGCGAAGCGCTGGAAAGCCTCGACAAGGATCGCAA
GTTCCTGACCGCCGGCGGCGTGTTCGACGACGACCAGATCGACTCGTTCATCGAGCTGAAGATGCAGGAAGTCATGCGCT
TCGAAATGACCCCGCATCCGGTCGAATTCGACATGTACTACTCTGCCTGA

Protein sequence :
MTTANDILKQIKDNDIKFVDLRFTDPKGKLQHVTMDVVCVDEDMFADGVMFDGSSIAGWKAINESDMVLMPDPATAHTDP
FFAQSTLVILCDILDPVSGEAYNRDPRGTAKKAEAYLKASGIGDTIFVGPEPEFFVFDDVKYKADPYNTGFKLDSSELPS
NDDTDYETGNLGHRPRVKGGYFPVPPIDSLQDMRSEMLTVLAEMGVVVEKHHHEVASAQHELGVKFDTMVSSADKMQIYK
YVVHQVANAYGKTATFMPKPIFGDNGSGMHVHQSIWKGGKPTFAGDEYAGLSENCLYYIGGIIKHAKAINAFTNPTTNSY
KRLVPGYEAPVLLAYSARNRSASCRIPFGSNPKAKRVEVRFPDPTQNPYLGFAAMLMAGLDGIKNKIHPGKPMDKDLYDL
PAKELKKIPTVCGSLREALESLDKDRKFLTAGGVFDDDQIDSFIELKMQEVMRFEMTPHPVEFDMYYSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-105 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_004279019.1 glutamine synthetase VFG1399 Protein 3e-109 50