|
Name : serS (AGROH133_06621) Accession : YP_004278952.1 Strain : Genome accession: NC_015183 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1650663 - 1651946 bp Length : 1284 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCACGACATTAAATGGATACGCGAAAACCCCGAAGCCTTTGATGCAGCACTTGCACGGCGCGGCGCAGAGCCTGCCGC AAGCAGCCTGATCGCTCTCGACGAAAAGCGCCGGTCCGTCATCCAGTCCCTGCAGGACATGCAGTCGCGTCGCAATGCCG CTTCCAAGGACATCGGCGCCGCCATGGCGCAGAAGAACATGGAGCTGGCGGAAAAGCTGAAAGCGGAAGTCGCCGACATC AAGGAAAACATGCCGCGCGCCGAGGAGGAGGACCGCCAGGTCACCGCCGAGCTTAACGACGCCCTGTCGCGCCTGCCCAA TATACCTTTCGACGATGTTCCTGACGGTAAGGACGAACACGACAATGTGGTGACCCGCGTGGTCGGCCAGAAGCCAGGCT GGAACCATGAAGCAAAGGAGCACTTCGAGATTGGCGAAGCGCTCGGCTACATGGATTTCGAGCGGGCTGCCAAGCTTTCC GGCTCGCGCTTCACCGTGCTGACCAGCCAGCTGGCGCGTCTGGAACGAGCGCTCGGCCAGTTCATGATCGACCTGCACAC CTCGGAACATGGCTACACGGAAGTGTCTTCGCCGCTGATGGTGCGCGATGAGGCGATGTTCGGCACCGGCCAATTGCCGA AGTTTTCCGAGGATCTGTTCAAGACTACCGATGGCCGCTGGTTGATCCCGACGGCGGAAGTGACTCTGACCAACCTTGTC TCCGGCGAAATTCTCGAGCAGGAAAAGCTGCCGCTGCGCTTTACGGCACTTACGCCGTCCTTCCGTTCGGAAGCGGGCTC TGCTGGCCGCGACACACGCGGCATGCTGCGCCAGCACCAGTTCTGGAAATGCGAACTCGTCTCCATCACCGACGCGGAAA GTGCTGTTGCCGAGCATGAGCGCATGACGGCCTGCGCCGAAGAAGTGCTGAAGCGTCTTGGCCTGCATTTCCGCACCATG ACGCTGTGCACCGGCGATATGGGTTTCAGCGCGCGCAAGACCTACGATCTGGAAGTGTGGTTGCCCGGCCAGAACACCTA CCGCGAAATTTCGTCCTGCTCCGTCTGCGGCGATTTCCAGGCGCGGCGCATGAATGCGCGTTATCGCGGCAAGGACGACA AGGCGACGAAGTTCGTGCACACGCTGAACGGCTCCGGCACCGCCGTCGGCCGCTGCCTCATCGCGGTTCTCGAAAATTAC CTGAACGACGACGGTTCCGTCACAATTCCAAACGTGCTGCTGCCCTATATGGGCGGTCTGAAGCGGATTGAGAAAGCGGC CTGA Protein sequence : MHDIKWIRENPEAFDAALARRGAEPAASSLIALDEKRRSVIQSLQDMQSRRNAASKDIGAAMAQKNMELAEKLKAEVADI KENMPRAEEEDRQVTAELNDALSRLPNIPFDDVPDGKDEHDNVVTRVVGQKPGWNHEAKEHFEIGEALGYMDFERAAKLS GSRFTVLTSQLARLERALGQFMIDLHTSEHGYTEVSSPLMVRDEAMFGTGQLPKFSEDLFKTTDGRWLIPTAEVTLTNLV SGEILEQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESAVAEHERMTACAEEVLKRLGLHFRTM TLCTGDMGFSARKTYDLEVWLPGQNTYREISSCSVCGDFQARRMNARYRGKDDKATKFVHTLNGSGTAVGRCLIAVLENY LNDDGSVTIPNVLLPYMGGLKRIEKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-87 | 50 |
