Gene Information

Name : strB (AGROH133_05578)
Accession : YP_004278477.1
Strain :
Genome accession: NC_015183
Putative virulence/resistance : Resistance
Product : streptomycin resistance protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG3570
EC number : 2.7.1.87
Position : 1175370 - 1176215 bp
Length : 846 bp
Strand : -
Note : Aminoglycoside/hydroxyurea antibiotic resistance kinase; Streptomycin 6-kinase

DNA sequence :
GTGAGCCGAGCTATCCCCTTTTTTCCGGCCTCGTGGAATATCGAGGCCGCAAAACAGATTGCCGATACGCCTGCCGGGGT
GGTTTACGAAGTCAGACTTGGCAATGGTTCCCTTGCCATCGCCAAGGTACTTAAACACAAGGTTCTGAAAGACAGCCTTC
GCGGGGCGGATTTCATCGAATGGCGGGCAGGTGTCGGCTGCGTGAAGCTGCTCGATCGCTCCGACGACATATTGCTCATG
GAACATGCCGGCAATGAGACATTGCGCGACGTGCTTTTTCGCGACGGCGACGATGATGCCACGACCGCAATCGCCGCCGA
TGTTCTCCTTCACTATCACCAGCCTTCAACGCAGACGCCACCAGCAAGCCTGCTGACGCTGCCGCAATATTTCGAAAGTC
TGTTCCGTAAAGCCGAGCACGATTGCAGCGAAGGCTTCGACAGCCCCTATATCGAAGCCGCTTCACTTGCCGAGGAGCTT
ATCGGGCACCAAAGCAATATTCGACCGCTGCACGGCGATCTGCATCACGAAAACATCATGCGCAGTGCGCGTGGCTGGAT
CATCATCGACCCGGCAGGCCTGATCGGCGATGAAGCACTCGACGTCGCCAACATGTTCTCCAATCCACTCGACCGCTTCG
ATCTGACACGCAGCGAGGCACGCATCGCCTCCATGGCGTCGATTTTTGCGAAAACGCTCAAACGGAACGAACGGGTGCTT
CTGCAATATGCCTTCGCCTACGGCTGCCTTTCGGCAGCATGGCACGAGGAAGATGGCAACACGCGCGAACGCGACGACGA
ACTGGCCGTCGCGACAACCATCAAATCTGTCCTGAAGCAATTTTAA

Protein sequence :
MSRAIPFFPASWNIEAAKQIADTPAGVVYEVRLGNGSLAIAKVLKHKVLKDSLRGADFIEWRAGVGCVKLLDRSDDILLM
EHAGNETLRDVLFRDGDDDATTAIAADVLLHYHQPSTQTPPASLLTLPQYFESLFRKAEHDCSEGFDSPYIEAASLAEEL
IGHQSNIRPLHGDLHHENIMRSARGWIIIDPAGLIGDEALDVANMFSNPLDRFDLTRSEARIASMASIFAKTLKRNERVL
LQYAFAYGCLSAAWHEEDGNTRERDDELAVATTIKSVLKQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00281 YP_008207746.1 Streptomycin 6-kinase Not tested AbaR25 Protein 2e-47 44
strB AEA34676.1 aminoglycoside resistance protein B Not tested Not named Protein 1e-47 44
BJAB0868_00285 YP_008211611.1 Streptomycin 6-kinase Not tested AbaR26 Protein 2e-47 44
strB YP_001800933.1 aminoglycoside-6-phosphotransferase Not tested Not named Protein 2e-47 44
strB AFV47999.1 streptomycin (6) phosphotransferase StrB Not tested delta-AbaR25 Protein 1e-47 44
strB AEZ06048.1 StrB, APH(6)-Id, streptomycin(6) phosphotransferase Not tested Tn6167 Protein 1e-47 44
strB ACK44538.1 StrB Not tested SGI1 Protein 1e-47 44
ABK1_0257 YP_005512829.1 Streptomycin resistance protein B Not tested AbaR4d Protein 1e-47 44
strB AGK07030.1 StrB streptomycin phosphotransferase Not tested SGI1 Protein 1e-47 44
ABZJ_00265 YP_005524221.1 streptomycin 3''-kinase Not tested AbaR22 Protein 1e-47 44
strB AGK07088.1 StrB streptomycin phosphotransferase Not tested SGI1 Protein 1e-47 44
strB YP_005176179.1 aminoglycoside 6-phosphotransferase protein Not tested ICEPmu1 Protein 1e-47 44
strB AFV47971.1 streptomycin (6) phosphotransferase StrB Not tested AbaR25 Protein 1e-47 44
strB AEQ20908.1 StrB, APH(6)-Id streptomycin(6) phosphtransferase Not tested Tn6166 Protein 1e-47 44
strB CAJ77026.1 Streptomycin phosphotransferase B Not tested AbaR1 Protein 3e-47 44
strB AFH57206.1 streptomycin resistance protein Not tested AbaR4a Protein 1e-47 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
strB YP_004278477.1 streptomycin resistance protein AF024602.1.gene6.p01 Protein 6e-48 44
strB YP_004278477.1 streptomycin resistance protein DQ464881.1.gene5.p01 Protein 7e-48 44
strB YP_004278477.1 streptomycin resistance protein NC_010410.6003392.p0 Protein 2e-47 44
strB YP_004278477.1 streptomycin resistance protein AJ313522.gene.p01 Protein 3e-42 42