Gene Information

Name : AGROH133_05489 (AGROH133_05489)
Accession : YP_004278446.1
Strain :
Genome accession: NC_015183
Putative virulence/resistance : Unknown
Product : DNA photolyase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0415
EC number : 4.1.99.3
Position : 1150770 - 1152209 bp
Length : 1440 bp
Strand : -
Note : DNA photolyase, FAD-binding, FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photolyase

DNA sequence :
ATGCCAACAAAATCCTCTCCTGTTATCGTCTGGTTCCGCAAGGACTTGCGTCTTGCGGACAATCTCGCCCTTCTCGCAGC
GGTGGAGCATGGCGGCCCCGTCATACCGATCTATATCCGTGAGACATCCAGCGGCCCGCTGGGCGGCGCGCAGGAATGGT
GGCTTCACCATTCGCTTGCCTCTCTTTCCGCGGCGCTGGAGAAATGCGGCAGCCGTCTACTGCTCAGAAGCGGCAACGCA
GAGGAGACGCTGCGCCGGCTTATAGCCGAGACCGGCGCGGATGCAGTCCTCTGGAACCGTCGCTATGAGCCAACCGGCAT
GGCAACGGACAAGGCAATAAAAGAGGCGCTTGGGGACGACGGACTGACAGTTCGCAGCTTTGCCGGACACCTGCTGCATG
AACCATCCCGGGTGCAGACCAAATCCGGCGGTCCCTACCGGGTCTACACGCCCTTCTGGCGGGCTCTGGAGGGTAGCGAG
GAGCCACATACGCCGGCGGATGCACCGCAGAGCCTGAAGGCACCTGAGACATGGTCAAAATCGGAGAAACTCGATGATTG
GAAACTTCTGCCGGTCAAACCGGACTGGGCGAAGGATTTCAGCGAGATATGGACACCCGGTGAAAATGCCGCGCGGGAAA
AACTCGATGATTTCATTGATGGTGCCTTGAAGGGTTATGAGGAAGGCCGCGATTTTCCGGCGAAGGACGCCACGTCGCTT
CTTGCGCCGCATCTGGCGCTCGGCGAAATATCGCCCGCCGCCGTGTGGCATGCGACGAAGGGACTCTCACGCCATATCGC
GTCCAACGATATCAGCCGTTTCCGCAAGGAGCTCGTCTGGCGGGAATTCTGCTACCATCTGCTGTTCCACTTTCCCGAGC
TGGACGAGAAAAACTGGAACGACAGTTTCGGCGCCTTCGGCTGGCGGGACGATGACACATCCTTCAACGCCTGGACGCGT
GGCATGACGGGTTATCCGATCGTGGATGCCGGCATGCGGCAATTGTGGAAACATGGCACGATGCACAACCGGGTGCGCAT
GATAGTGGCATCCTTCCTCATCAAACATCTACTTATCGACTGGCGCAAAGGAGAGAAGTGGTTTCGCGATACGCTTGTTG
ATGCCGATCCGGCCTCCAACGCTGCCAACTGGCAGTGGGTGGCGGGTTCGGGCGCGGACGCCTCGCCGTTCTTCCGCATT
TTCAACCCCATATTGCAGGGGGAGAAATTCGATGCCGAGGGAGACTACGTGCGCCGCTTCGTGCCGGAGCTTGAAAGGCT
TGAGCGAAAATACATCCACAAGCCGTTTGAAGCACCGAAAGAGGTGCTTAAAAAGGCGGGTATCGAGCTCGGCAAGACCT
ATCCCCTGCCGATCGTCGACCATGGGAAGGCACGGGAAAGAGCACTTGCAGCCTATGCCGAAGTGAAGAACAACGCATAA

Protein sequence :
MPTKSSPVIVWFRKDLRLADNLALLAAVEHGGPVIPIYIRETSSGPLGGAQEWWLHHSLASLSAALEKCGSRLLLRSGNA
EETLRRLIAETGADAVLWNRRYEPTGMATDKAIKEALGDDGLTVRSFAGHLLHEPSRVQTKSGGPYRVYTPFWRALEGSE
EPHTPADAPQSLKAPETWSKSEKLDDWKLLPVKPDWAKDFSEIWTPGENAAREKLDDFIDGALKGYEEGRDFPAKDATSL
LAPHLALGEISPAAVWHATKGLSRHIASNDISRFRKELVWREFCYHLLFHFPELDEKNWNDSFGAFGWRDDDTSFNAWTR
GMTGYPIVDAGMRQLWKHGTMHNRVRMIVASFLIKHLLIDWRKGEKWFRDTLVDADPASNAANWQWVAGSGADASPFFRI
FNPILQGEKFDAEGDYVRRFVPELERLERKYIHKPFEAPKEVLKKAGIELGKTYPLPIVDHGKARERALAAYAEVKNNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CD241_0111 YP_005124380.1 putative riboflavin biosynthesis protein Not tested Not named Protein 1e-67 45
DIP0113 NP_938509.1 riboflavin biosynthesis protein Not tested Not named Protein 1e-66 44