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Name : Pedsa_0830 (Pedsa_0830) Accession : YP_004273224.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 1036910 - 1037989 bp Length : 1080 bp Strand : + Note : COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR008089: IPR 001509; KEGG: cte:CT0230 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase family protein; DNA sequence : ATGAAAATTTTAGTAACAGGAAGCGCAGGCTTCATTGGATTCCATTTAGTGAACAGTTTATTACAAAGGGGAGACGAAGT TGTAGGGATAGATAATTTAAACGACTATTATGACGTCAATTTAAAATATGCAAGGTTGGCTCAGGCAGGAGTTTATCAGG AAACAATAACATATAAAAAAGAGATTCGAAGCTCACTTTTTGAAAACTATATTTTCGTGCAACTGGATATTACGGATGAA AAAGGCTTAAGCGCATTGTTTAAAAAGCATAAATTTGACGCTGTCTGCAATTTAGCTGCTCAAGCAGGGGTAAGGTATAG TTTAATAAACCCGAGTACGTATATCGATACAAATATCAAAGGTTTCCTGAATATTTTGGAATGTAGCAGGCATACCAACA TGAAAAATCTGGTTTATGCAAGTTCTTCCAGCGTATATGGATTAAATAAAAAGATGCCTTTTAATGTGAAAGACAATGTA GACCATCCTGTTTCGCTGTATGCCGCTTCTAAAAAAAGTAACGAATTAATGGCTCATGCCTATAGTCATTTATTCAATAT TGCTACAACCGGCTTGCGCTTCTTTACTGTTTATGGCCCATGGGGCAGGCCTGATATGGCAGGTTTTTTGTTTGCTAAAG CCATATCGGAAGGAAAATCTATTCAGATATTTAATAACGGAAACATGAAACGGGATTTCACTTATATAGATGATATAATA GCAGGTGTTATTACGGTTATAGATAATCCTAATTATAACGGAACGGAAAGTTGGAGTGGACTAACACCAGATCCGTCTTG TTCTAAAGCGCCGTATAGAGTATTTAATATAGGAAGAGGGAATTCTATAGATTTGATGAGTTTTATCAACGAAATAGAAG GTAATCTCGGTACAAGAGCTCAGAAGACATATTTACCTTTACAAGATGGCGATGTAGTATGTACTTGGTCCGATGTTAAA AATTTAAAAAAAGAGTTCGACTATGAGCCAAAAGTGTCTGTAAAAGAAGGTGTAAAAAGATTTACAGATTGGTATAAAAG TTACTATCTGGATAGACAAGATCAGCATATAGCTGTTTAA Protein sequence : MKILVTGSAGFIGFHLVNSLLQRGDEVVGIDNLNDYYDVNLKYARLAQAGVYQETITYKKEIRSSLFENYIFVQLDITDE KGLSALFKKHKFDAVCNLAAQAGVRYSLINPSTYIDTNIKGFLNILECSRHTNMKNLVYASSSSVYGLNKKMPFNVKDNV DHPVSLYAASKKSNELMAHAYSHLFNIATTGLRFFTVYGPWGRPDMAGFLFAKAISEGKSIQIFNNGNMKRDFTYIDDII AGVITVIDNPNYNGTESWSGLTPDPSCSKAPYRVFNIGRGNSIDLMSFINEIEGNLGTRAQKTYLPLQDGDVVCTWSDVK NLKKEFDYEPKVSVKEGVKRFTDWYKSYYLDRQDQHIAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-89 | 53 |
