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Name : Pedsa_0620 (Pedsa_0620) Accession : YP_004273018.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 758764 - 759504 bp Length : 741 bp Strand : - Note : COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; InterPro IPR004528: IPR 003329; KEGG: phe:Phep_2582 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransf DNA sequence : ATGAAAATTTTAGGAGTGATACCCGCCAGATTTGCCTCTACGCGATTTCCTGGAAAGCCGTTGGTAGATATAGCTGGAAA AACAATGATACAGAGGGTCTACGAAAAGTCGTCCTCGGCAACAACTTTAAATGATTTGGTTGTCGCCACAGATGACAAAC GTATTTACGATACCGTGAAATCATTTAATGGAAACGTTATTATGACTTCTTCTGACCATCAAAGCGGCACAGATCGATGT GCAGAAATTGCAGAAAAAGTTACAGGTTACGATGCTATCATCAATATCCAGGGAGACGAACCATTGGTTGATCCAAATCA AATTAATCTGGTAGCTGCATGTTTCAATTCAGCAGATACTCAACTGGCTACTTTGGTAAAAAAGATAAAAACCCAGGACG AACTCTTTAACAACAATACTCCTAAAGTACTGTTAAATTCAAAAAACGAAGCTTTATATTTTAGCCGTGAAACAGTGCCT TTTTTAAGAAACTACGATAAAAAAGACTGGTTAAAACATCATACATTCTATAAACATATTGGTATATACGGATATACGGT TAATGTTCTTAAAGAAATATCCAAACTATCTATAAGCTCATTAGAAATGGCCGAATCATTAGAACAATTAAGATGGCTTG AAAATGGCTATCGCATTAAAGTTTCTTTTACCGATTCCGAAACTCTCGCTATTGATACACCGGAAGACTTAGAAAAAGTA TTATCTGTGATCAACAGATAG Protein sequence : MKILGVIPARFASTRFPGKPLVDIAGKTMIQRVYEKSSSATTLNDLVVATDDKRIYDTVKSFNGNVIMTSSDHQSGTDRC AEIAEKVTGYDAIINIQGDEPLVDPNQINLVAACFNSADTQLATLVKKIKTQDELFNNNTPKVLLNSKNEALYFSRETVP FLRNYDKKDWLKHHTFYKHIGIYGYTVNVLKEISKLSISSLEMAESLEQLRWLENGYRIKVSFTDSETLAIDTPEDLEKV LSVINR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 4e-36 | 42 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 3e-36 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-36 | 42 |
