Gene Information

Name : Pedsa_0583 (Pedsa_0583)
Accession : YP_004272984.1
Strain : Pedobacter saltans DSM 12145
Genome accession: NC_015177
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : 1.20.4.1
Position : 718792 - 719208 bp
Length : 417 bp
Strand : +
Note : COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: dfe:Dfer_1929 protein-tyrosine phosphatase, low molecular weight; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SP

DNA sequence : 
ATGACAAAAAAAGTATTAGTTCTTTGCACAGGAAACAGTTGCAGAAGCCAAATTGCGGAAGGATATTTAAGACATTTTGC
AGGGCAGAAAGCAGAAGTTTTTAGTGCAGGTGTAGAAACTCATGGCGTAAACCCGAAAGCAATCGCTACGATGAAAGATG
ACGGAATTGATATTTCAAATCATACCTCAAATAACATTGACGAATATCGAGACATAGATTTTGACTTTGTAATAACGGTT
TGTGATAATGCCAAAGAACGCTGTCCTTTCTTTCCGACAAAAGCTCGAAAGTTTCATTATAATTTTCCAGACCCAGCAAA
AGCAATAGGAACAGACGAGGAAATTGCCACAGAATTTAGAAAAGTAAGACAGCAAATTAAAGATTATTGCGAAAATTTTG
TTGCTGAAAATTTGTAA

Protein sequence : 
MTKKVLVLCTGNSCRSQIAEGYLRHFAGQKAEVFSAGVETHGVNPKAIATMKDDGIDISNHTSNNIDEYRDIDFDFVITV
CDNAKERCPFFPTKARKFHYNFPDPAKAIGTDEEIATEFRKVRQQIKDYCENFVAENL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 9e-23 49
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 1e-23 48
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 3e-22 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pedsa_0583 YP_004272984.1 protein tyrosine phosphatase BAC0580 Protein 3e-24 50
Pedsa_0583 YP_004272984.1 protein tyrosine phosphatase BAC0032 Protein 3e-23 49
Pedsa_0583 YP_004272984.1 protein tyrosine phosphatase BAC0581 Protein 3e-25 48