|
Name : Pedsa_0454 (Pedsa_0454) Accession : YP_004272858.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Unknown Product : lipoprotein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 553581 - 554393 bp Length : 813 bp Strand : + Note : COGs: COG1464 ABC-type metal ion transport system periplasmic component/surface antigen; InterPro IPR004478: IPR 004872; KEGG: fjo:Fjoh_3984 YaeC family lipoprotein; PFAM: NLPA lipoprotein; SPTR: ABC superfamily ATP binding cassette transporter, binding p DNA sequence : ATGAACGCTATAAAAAGAATATTGGCACTTGCTATAATTCCCATCTTATTACAAGCTTGCGGCGGCGGTGCAAAAAAAGA TAACCCAAATCTAATTAGGGTTGGTATTACATCGGGGCCTGAAAGAGAATTGGCTGAAGCAGCAAAAAAAGTTGCCGCAG AGAAGTATAATCTGGATGTGGAATTGGTTATTTTTAACGATTATGTAGTACCTAATGAAGCGTTGAATAACGGAGATATC GATGTGAATGTTTTTCAGCATGAACCTTATTTAAAAGAGCAATCAGCTAAAAGAGGTTATGAATTGGCTGTGGTTGGAAA AACTTTTGTTTATCCGATCGTTGGCTATTCAAAGAAAATTAAAAACATCGATGAGCTAAAGCCGGGAAGTACAATCGCTA TTCCTAATGACCCAACAAACGGTGGCCGTTCTTTATTGCTTTTGCAAAGATATGGACTTTTGAAACTGAAGGATGGTGTG GGGCTTTTGCCACGGGTGACTGATATTATAGAAAATCCTAAAAATCTAAAAATTCTAGAGATCGAAGCTCCGCAATTGAG TCGGGTAGTGGATGATAAGGAGGTTGTTATGGCTATTATCAATAATAACTTTGCTGCGCAGGCAGGCCTTGATGCTAATG AATACGGTGTTTTAAAGGAAGATAAGGAATCTCCATATGTAAATATTATTGTTGCCAGAGAAGATAATAAAGGCCAGGAT AAAGTAAAGAATTTTGTGAAAGCATATCAATCAAAAGAGGTTGAAGAGGCGGCAGAAAAAGCCTTTAAAGGTGGAGCTGT AAGGGGATGGTAG Protein sequence : MNAIKRILALAIIPILLQACGGGAKKDNPNLIRVGITSGPERELAEAAKKVAAEKYNLDVELVIFNDYVVPNEALNNGDI DVNVFQHEPYLKEQSAKRGYELAVVGKTFVYPIVGYSKKIKNIDELKPGSTIAIPNDPTNGGRSLLLLQRYGLLKLKDGV GLLPRVTDIIENPKNLKILEIEAPQLSRVVDDKEVVMAIINNNFAAQAGLDANEYGVLKEDKESPYVNIIVAREDNKGQD KVKNFVKAYQSKEVEEAAEKAFKGGAVRGW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nlpA | AAW51766.1 | NlpA | Not tested | AGI-3 | Protein | 5e-47 | 54 |
