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Name : Pedsa_0353 (Pedsa_0353) Accession : YP_004272757.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Unknown Product : L-ribulose 5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : 5.1.3.4 Position : 441366 - 442067 bp Length : 702 bp Strand : + Note : COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: phe:Phep_2730 L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; SPTR: Class II aldolase/adducin family protein; DNA sequence : ATGAGTAAATATAAATTCATAAGACAGTCTGCATATGAGAGCAATATGCAACTTCCAAAATTAAATTTGGTGTTCTCTAC TTTTGGGAATGTGAGTGTAGTAGACAGAATAGAAAAAGTTTTCGCTATAAAGCCAAGTGGTTTGCCTTACGAGAAGCTTT CACCAGATAATATGGTGATTTGCGATTTTGAAGGAAACGTGGTAGAAGGGGATTTAAGGCCATCTTCTGATACTAAGACA CATGCGGTTTTATATAAGCATTGGGAACATATCGGAGCGGTGGTTCATACGCACTCTAAACATGCTACTGCCTGGGCGCA AGCACAGAGAGATATTCCGATTTTTGGAACTACTCATGCAGATTATTTGACTACTGATATTCCTTGTGCGCCACCAATGG ATGATGCGAAGATTGTAGGGAACTATGAGTATGAAACGGGATTCCAGATTTTAGATCATTTCAAAAATAATAATTTGAAA TATGAAGAAGTAGAAATGGTTTTAGTAGGGAATCATGCTCCTTTCACTTGGGGAAAAACTGGTGAAAAGGCTGTTTTTAA CAGCGCTTTATTAGAGTATGTTGCAGAATTAGCTACGTTAACAGAGCAAATTAATCCCAAAGCTCCGAGATTAAAAGATT CTTTAATCAACAAGCACTGGGAGAGAAAGCATGGTGCTAATTCTTATTACGGACAATGTTAA Protein sequence : MSKYKFIRQSAYESNMQLPKLNLVFSTFGNVSVVDRIEKVFAIKPSGLPYEKLSPDNMVICDFEGNVVEGDLRPSSDTKT HAVLYKHWEHIGAVVHTHSKHATAWAQAQRDIPIFGTTHADYLTTDIPCAPPMDDAKIVGNYEYETGFQILDHFKNNNLK YEEVEMVLVGNHAPFTWGKTGEKAVFNSALLEYVAELATLTEQINPKAPRLKDSLINKHWERKHGANSYYGQC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 9e-49 | 52 |
