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Name : Pedsa_3527 (Pedsa_3527) Accession : YP_004275879.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 4199513 - 4201777 bp Length : 2265 bp Strand : - Note : COGs: COG2183 transcriptional accessory protein; InterPro IPR006641: IPR 003029: IPR 018974; KEGG: phe:Phep_4177 RNA binding S1 domain protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; SPTR: DNA sequence : ATGTCAGATAAGCATATTTACATTGTTGCGCAGGAACTGAGCGTAGGAAGCAAACAAGTGAGCGCGACGCTTAATCTATT AGACGAAGGTGCTACAGTACCTTTCATTTCACGATACAGAAAAGAGCTAACCGGCAGCCTGGATGAAGTTCAGGTAACGG CTATCAGAGACAGAATACAACAATTAAGGGAGCTTGACAAAAGGAGAGAAGCCATCTTAAAGTCTATAGAAGAACAGGGT AAGTTGACAGACGCATTAAAAGCACAGATTGAAGCTGCTGAGACCATGTCGGCACTGGAAGATATTTATCTGCCTTACAA ACCTAAGCGTAAAACTAAAGCTTCTGTTGCCCGTGAAAAAGGTTTGGAACCTTTAGCACTTTCTATTTTAGAGCAGGACA AAAGTACGCCGGAAGAAGAGGCTGAGGCTTTTATCAGCGAAGAAAAAGGTGTAAATTCTGTTATAGAAGCCTTACAGGGT GCAAGAGACATCATTGCTGAAAACATTGCCGAAAATGCAGAAGCAAGAGCAAAAATAAGGGAATTATTCCTGCAAAAAGG AACATTCAAATCAGAAGTTTTTAAAGGTAAAGAAGAAGAAGGGATCAAATATAAAGACTATTTTGAATGGGAAGAACCTA TTAGTTCGGCTCCTTCGCACAGAATTTTAGCTATGCGCCGTGGAGAAAAAGAATTGATCCTGAAACTGGATGTGCTTCCC CAGGAAGAAGACGCTATCGAAATTCTGGAAAGACAATTCATTACCGCAAATAACACCAAATCTGCTCAGGTAAAACAGGC CCTGGAAGATGGATATAAACGCCTTTTAAGACCAAGTATGGAAACCGAGGTTCGTTTATTGACCAAACAAAAAGCTGATG AAGAAGCTATTTTAGTTTTTGCAGAAAATGCCAGACAGTTACTTTTAGCTGCTCCTATGGGGCAAAAAAATGTAATGGCT TTAGACCCTGGATTCAGAACCGGCTGTAAATTGGTATGCCTGGACAGACAGGGCAAGCTTTTGGAAAACACAACCATTTA TCCGCATACCGGCGCGGGTCAATTAAAAGAAGCCGAACAGACTTTGAACTATCTGGTTAAGAAACATGAGATAGAAGCCA TTGCCATTGGAAACGGTACTGCCGGCCGCGAGACAGAGGAATTTGTCAGAAAGCAGCAAATCCCTAATGTACAAATCGTA ATGGTTAACGAAAGTGGGGCTTCCATCTATTCCGCATCGGAAGTAGCCAGAGAAGAGTTTCCAGATCATGATGTTACTGT CAGAGGCGCTGTTTCAATAGGTAGAAGATTAATGGATCCTTTGGCAGAACTGGTAAAAATAGATCCAAAATCAATAGGTG TAGGGCAATACCAACATGATGTAGACCAAAATAAACTACAAACGTCCTTAGACGACACGGTAATAAGCTGTGTGAATGCT GTAGGGGTCGAACTGAATACAGCGTCTAAACAAATATTGGCCTATGTATCGGGTTTAGGGCCACAGTTAGCACAAAATAT TGTTGAATATAGAAATACAAACGGTGCTTTTAAAAACAGAGCATCACTCAAAAAAGTACCTCGTCTGGGCGAAAAAGCAT TTGAGCAGGCGGCAGGTTTTTTAAGAATAAGAAATGCAGAAAATCCACTGGACACCAGTGCTGTCCACCCCGAACGCTAT GGATTGGTTGAACAAATGGCTAAAGACTTAGGCTGTAAGGTAGAAGATTTAATGAAAAATGAATCTTTAAGAAAGCAAAT AGACCTAAAAAAATATATAAGCGACGAGGTTGGTTTACCAACACTACAGGATATCATAGCTGAATTAGCCAAACCCGGAA GAGACCCACGCGAACAGTTTGAAGCTTTCTCTTTTGCTGATGGCATTAATACCATAAACGACCTGAGAATCGGAATGAAA CTCCCGGGAATTGTAACCAACATTACAAATTTTGGTGCTTTCGTAGATATCGGTGTTCATCAGGACGGGTTGGTACATTT AAGCCAAATGTCAGACCGCTTTATTTCCAATCCTAATGAAGTTGTTAAAGTTCAGCAAAGAGTAGAGGTGACAGTAACCG AAATTGATACCGCCAGAAACAGAATTGGCCTGTCAATGAAAGGGAATGGACCTGCTAAAAAAACTGATAAATCTCAGGAC AGAAAAGAAAATTTTAAAAACACGAATAAAAACGAACGCAGGAAACCGGAACCAGAAACGGATATGCAGAGCAAATTAGC TGCATTGATGGGTAAGTTCAAATAA Protein sequence : MSDKHIYIVAQELSVGSKQVSATLNLLDEGATVPFISRYRKELTGSLDEVQVTAIRDRIQQLRELDKRREAILKSIEEQG KLTDALKAQIEAAETMSALEDIYLPYKPKRKTKASVAREKGLEPLALSILEQDKSTPEEEAEAFISEEKGVNSVIEALQG ARDIIAENIAENAEARAKIRELFLQKGTFKSEVFKGKEEEGIKYKDYFEWEEPISSAPSHRILAMRRGEKELILKLDVLP QEEDAIEILERQFITANNTKSAQVKQALEDGYKRLLRPSMETEVRLLTKQKADEEAILVFAENARQLLLAAPMGQKNVMA LDPGFRTGCKLVCLDRQGKLLENTTIYPHTGAGQLKEAEQTLNYLVKKHEIEAIAIGNGTAGRETEEFVRKQQIPNVQIV MVNESGASIYSASEVAREEFPDHDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNKLQTSLDDTVISCVNA VGVELNTASKQILAYVSGLGPQLAQNIVEYRNTNGAFKNRASLKKVPRLGEKAFEQAAGFLRIRNAENPLDTSAVHPERY GLVEQMAKDLGCKVEDLMKNESLRKQIDLKKYISDEVGLPTLQDIIAELAKPGRDPREQFEAFSFADGINTINDLRIGMK LPGIVTNITNFGAFVDIGVHQDGLVHLSQMSDRFISNPNEVVKVQQRVEVTVTEIDTARNRIGLSMKGNGPAKKTDKSQD RKENFKNTNKNERRKPEPETDMQSKLAALMGKFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-153 | 50 |
