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Name : Pedsa_3343 (Pedsa_3343) Accession : YP_004275700.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Unknown Product : D-xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 3975054 - 3976385 bp Length : 1332 bp Strand : - Note : COGs: COG2115 Xylose isomerase; InterPro IPR001998: IPR 013452: IPR 012307; KEGG: phe:Phep_1604 xylose isomerase; PFAM: xylose isomerase; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase-like TIM barrel; T DNA sequence : ATGTCAATCATTACAGGAGAAACCGAATTTTTTAAAGGGATTGGAAAAATTCAATATGAAGGAAAAGAATCTAAAAACCC ATTGGCTTTTAGATTTTATGACGAAAACAGAATAGTTGGCGGTAAAACGATGAAAGAGCACTTGAAATTTGCTTGTGCTT ATTGGCATTCGTTCTGTGGGAATGGTGCAGATCCTTTTGGAGAACCTACTCATATATTTCCTTGGGATGCAAAAAAAGAT CCTATTGAGAGAGCAAAGGATAAAATGGATGCTGCTTTTGAGTTTATCACGAAAATGAATATTCCTTACTATTGTTTCCA TGATGTTGACGTGGTTGATTACGGAACAGATATTCTTGAAAACGAAAGAAGACTACAGGCTTTAGTAGAGTATGCGCAGC AGAAACAAAAAGAAAGCGGAGTAAAATTACTTTGGGGTACAGCCAATTTGTTTTCTAACAGAAGATACATGAATGGTGCT ATTACCAACCCGGATTTTCATGTATTAACACATGGCGCTGCACAAGTTAAAGCCGCAATCGATGCTACCATAGCCTTAGG AGGAGAAAATTATGTTTTCTGGGGCGGCAGAGAAGGTTATATGTCTTTATTAAATACGGACATGAAACGTGAGAAAGAAC ATTTCGCAAAATTCTTACATACTGTAAAAGACTATGCTAGAAAAAATGGTTTCAAAGGGACTTTCTTTATTGAACCAAAA CCTTGCGAACCATCTAAACATCAATATGATTACGATGCGGAAACAGTTATCGGATTTTTAAGACAATACGATTTATTGAA TGATTTCAAATTAAATCTGGAAGTTAACCATGCTACACTAGCCGGACATACTTTCCAACATGAATTGCAAGTTGCCGTAG ATGCTGGTTTATTGGGGTCTATTGATGCAAACAGAGGTGACTACCAAAACGGATGGGACACCGATCAATTCCCTAACAAC ATCAACGAACTGGTTGAATCTATGCTGATTATCCTTAGCGGTGGTGGTTTACAAGGCGGAGGTGTAAACTTCGACGCAAA AATCAGGAGAAACTCTACAGATCCGGAAGATTTATTCTACGCACATGTTGGCGGCATGGATATCTTCGCTAAAGCACTGC TGGTTGCTGATGAAATTCTTTCAAATTCTGACTATAATAAAATAAGAACTGAGAGATACGCTTCGTTTGATTCTGGAAAA GGAAAAGAGTTTGAAGAAGGTAAATTGAGCTTAGAAGATTTAAAAGCATATGCAATTAGTAATGGCGAACCTAAAATGAG AAGCGGTAAGCAAGAATTTTTAGAAAACGTTATTAATAATTATATTTTTTGA Protein sequence : MSIITGETEFFKGIGKIQYEGKESKNPLAFRFYDENRIVGGKTMKEHLKFACAYWHSFCGNGADPFGEPTHIFPWDAKKD PIERAKDKMDAAFEFITKMNIPYYCFHDVDVVDYGTDILENERRLQALVEYAQQKQKESGVKLLWGTANLFSNRRYMNGA ITNPDFHVLTHGAAQVKAAIDATIALGGENYVFWGGREGYMSLLNTDMKREKEHFAKFLHTVKDYARKNGFKGTFFIEPK PCEPSKHQYDYDAETVIGFLRQYDLLNDFKLNLEVNHATLAGHTFQHELQVAVDAGLLGSIDANRGDYQNGWDTDQFPNN INELVESMLIILSGGGLQGGGVNFDAKIRRNSTDPEDLFYAHVGGMDIFAKALLVADEILSNSDYNKIRTERYASFDSGK GKEFEEGKLSLEDLKAYAISNGEPKMRSGKQEFLENVINNYIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 1e-96 | 49 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 1e-96 | 49 |
