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Name : Pedsa_3228 (Pedsa_3228) Accession : YP_004275586.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 3843211 - 3844509 bp Length : 1299 bp Strand : + Note : COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR 001732: IPR 014026: IPR 014027; KEGG: fjo:Fjoh_0356 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydroge DNA sequence : ATGTTAGACCATCAAACAGATAAAAGAATAGCAGTACTGGGTTTAGGTTATGTTGGCTTACCTTTGGCTTGCCTTTTTGC TACTAAATATCCTGTAGTGGGGTTTGATATTGATGAAGAGCGTATCGCTGCACTCCGAGGAGGGTATGACCGAACGGGAG AAGTTGAGAAAAAGCGTTTACTGGACCTTACCTTAAGTGAAACACCGTTCTTTTCTGAACATGAAGGTATCTATTTCTCT GCAGATATAGAGTCTATCAGGAGTGCGAATGTTTATATCATAACTGTACCAACCCCTGTTGATAAAAATAATCATCCGGA TATGAGACTACTTTTCAAAGCCTCTGAAATAGTAGGAAAGGTGATCTCGAATGGGGATGTTGTAATTTATGAGTCGACAG TTTATCCTGGAGCCACAGAAGAAGATTGTGTCCCTATTATAGAGTCTGTTTCCGGTTTAAATTATAATAAAGATTTTTTT GTCGGTTATTCACCAGAGCGTATTAATCCGGGCGATAGGGAACGAACTGTTGAAAAAATCCGAAAAATTACATCCGGGTC TAATCCCCAAACTGCTTTAACAGTAGACGAATTGTACAAATCCGTTATCGTTGCCGGAACTTATTTAGCACCAACTATCA AAGTTGCGGAAGCAGCAAAAGTTATCGAAAATTCACAAAGAGATATTAACATAGCTTTTGTTAACGAACTGGCAATTATG TTCAACCTAATGGGGATAGATACGCAGGAAGTACTGGCTGCTGCCGGTACAAAATGGAATTTTTTACCTTTTAAACCGGG TCTGGTTGGGGGGCATTGTATAGGTGTTGACCCTTATTACCTTGCACAAAAGGCCCAACAATATGGCTATCATCCTGAAA TATTGTTAGCCGGACGGAGACTAAATGATGCCATGGGAGAGTATGTTGCTTCTCAGATTGTAAAATGCATGGTTAAGAAA GATATTAATATCAAGGGTGCCGAAGTGTTGATGCTGGGCTTTACTTTTAAAGAGAATTGCTCTGATGTGAGAAATACCAA GGTTATTGATATTGTCGAAAATCTGATGGACTATGGCCTTGATGTAGTTGTTTATGACCCCTATGCAGATCACGCTGAAG TGGAAAAACAGTATGGGGTGAAGTGTCAAAGTAGTTTAGATACGAAGAAATACGATGCTTTGGTTTTAGCAGTAGCCCAT CAGGAGTTTGAGACTATCAGATTTGGTGATCTTAAAAAAGACAAATCAATTATTTATGATGTAAAAGGACTTCTTCCCTA CGCTGATGGCAGATTGTAA Protein sequence : MLDHQTDKRIAVLGLGYVGLPLACLFATKYPVVGFDIDEERIAALRGGYDRTGEVEKKRLLDLTLSETPFFSEHEGIYFS ADIESIRSANVYIITVPTPVDKNNHPDMRLLFKASEIVGKVISNGDVVIYESTVYPGATEEDCVPIIESVSGLNYNKDFF VGYSPERINPGDRERTVEKIRKITSGSNPQTALTVDELYKSVIVAGTYLAPTIKVAEAAKVIENSQRDINIAFVNELAIM FNLMGIDTQEVLAAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQQYGYHPEILLAGRRLNDAMGEYVASQIVKCMVKK DINIKGAEVLMLGFTFKENCSDVRNTKVIDIVENLMDYGLDVVVYDPYADHAEVEKQYGVKCQSSLDTKKYDALVLAVAH QEFETIRFGDLKKDKSIIYDVKGLLPYADGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-110 | 56 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-110 | 56 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 8e-107 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pedsa_3228 | YP_004275586.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 1e-110 | 56 |
