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Name : Pedsa_1993 (Pedsa_1993) Accession : YP_004274368.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 2332151 - 2332609 bp Length : 459 bp Strand : + Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR000037: IPR 020081; KEGG: phe:Phep_1552 SsrA-binding protein; PFAM: SmpB protein; SPTR: TmRNA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGGCAGCCAAGATTACAAATAACATTAATATTAGAAACAAAAAGGCAACTTTTGAATACAACATTCTGGAGAAGTTTGT TGCTGGTATTAAGCTGCTGGGAACTGAAATAAAATCTATCCGACAAAGTAAAGCTAACATTGGCGATTCTTTCTGTGCTT TTATAAATGGCGAACTGTATGTAAGAAATATGGATATTGCAGAATATTCACATGGTTCTTTTTATAATCACGAGGCCAAA AGAGACAGAAAACTCCTGCTTACCAAAAAGGAGTTGAAAAAACTGATAATAAAAGGTGAGGATAAGGGGTTAACTATTAT TCCACTTCGAATTTTCATTAATGAAAGGGGATTTGCCAAAATGGAGATCGCCTTGGCGCAGGGTAAAAAATCTTTTGATA AACGTGAATCTATTAAAGAACGTGATATCAAGAGAGAAATGGACCGTATGGTAAAATAA Protein sequence : MAAKITNNINIRNKKATFEYNILEKFVAGIKLLGTEIKSIRQSKANIGDSFCAFINGELYVRNMDIAEYSHGSFYNHEAK RDRKLLLTKKELKKLIIKGEDKGLTIIPLRIFINERGFAKMEIALAQGKKSFDKRESIKERDIKREMDRMVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-16 | 45 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 3e-17 | 42 |
