Gene Information

Name : Pedsa_1894 (Pedsa_1894)
Accession : YP_004274270.1
Strain : Pedobacter saltans DSM 12145
Genome accession: NC_015177
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 2223486 - 2224520 bp
Length : 1035 bp
Strand : -
Note : COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR004706: IPR 002657; KEGG: fjo:Fjoh_2991 arsenical-resistance protein; PFAM: Bile acid:sodium symporter; SPTR: ACR3 family arsenical resistance-3 transporter; TIGRFAM: arsenical-resi

DNA sequence :
ATGCAACCAAAACTAAAATTTCTCGATAGATATCTAACATTATGGATATTTATTGCAATGATAGCAGGGGTAACGATTGG
ATATGTATTTCCTAATATGCCTATGGTGGTAGAAAGTTTAAGTGTGGGTACAACTAATATTCCTTTGGCATTAGGTTTAA
TTATTATGATGTTTCCTCCATTAGCAAAGGTTGATTATACACTCTTACCTCAAGCATTTAAAAATAAAAAGGTTATAGGA
ATTTCCTTGTTGCTTAATTGGTTAATTGGAACAATTTTAATGTTTGGCTTGGCAGTTCTATTTCTACACGACGAACCCGA
CTATATGTCTGGATTAATTCTTATTGGATTAGCGAGGTGTATTGCAATGGTTATTGTTTGGAGTGATTTAGCCAAAGCAA
ATAGAGAATATACCGCAATGTTAGTAGCATTGAATAGTATTTTCCAAGTATTGTTTTATAGCTTTTTAGTCTGGTTATTT
ATCAATGTATTGCCAAATAAATTAGGTTTAGCCAATTTTAATGTTTCGGTTTCCATGATGGAAGTAACCAAAAGTGTTTT
CATCTATTTAGGCATTCCTTTTTTAGCAGGTTTTATCACACGTTATACACTCATTAAATCAAAAGGTATTGAATGGTATA
ATCGTGTATTTGTACCCAAAATATCTCCTATAACACTATATGCATTATTATTCACCATCGTGGTGATGTTTAGTTTGAAA
GGAGATAAAATACTTGAATTGCCAATGGATGTAGTAAAAGTTGCAATTCCTTTGGTTATTTATTTTGTGCTGATGTTCTT
CGTAAGTTTCTTTATTAATAGGGCAATGAAAGTTCCTTATGATAAAAATGCTTCGATAGCATTTACCGCTACAGGTAATA
ATTTCGAATTAGCCATTGCAGTTGCTATCGCTTTATTTGGCATCCATTCACCCCAAGCATTTGTAGGCGTTATAGGTCCA
TTGGTCGAAGTGCCTGTTTTAATCCTATTGGTTAAAGCGAGTTTGTGGTTGAAGGATATGTTTTATAAACACTAG

Protein sequence :
MQPKLKFLDRYLTLWIFIAMIAGVTIGYVFPNMPMVVESLSVGTTNIPLALGLIIMMFPPLAKVDYTLLPQAFKNKKVIG
ISLLLNWLIGTILMFGLAVLFLHDEPDYMSGLILIGLARCIAMVIVWSDLAKANREYTAMLVALNSIFQVLFYSFLVWLF
INVLPNKLGLANFNVSVSMMEVTKSVFIYLGIPFLAGFITRYTLIKSKGIEWYNRVFVPKISPITLYALLFTIVVMFSLK
GDKILELPMDVVKVAIPLVIYFVLMFFVSFFINRAMKVPYDKNASIAFTATGNNFELAIAVAIALFGIHSPQAFVGVIGP
LVEVPVLILLVKASLWLKDMFYKH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 9e-72 61
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 7e-95 60
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 5e-95 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pedsa_1894 YP_004274270.1 arsenical-resistance protein BAC0573 Protein 5e-96 61
Pedsa_1894 YP_004274270.1 arsenical-resistance protein BAC0004 Protein 2e-77 53