|
Name : Pedsa_1783 (Pedsa_1783) Accession : YP_004274161.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2072965 - 2075508 bp Length : 2544 bp Strand : - Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterPro IPR001270: IPR 004176: IPR 003959: IPR 001943: IPR 013093: IPR 019489: IPR 018368: IPR 003593; KEGG: phe:Phep_1132 ATPase AAA; PFAM: ATPase AAA; Clp domain protein; ATPase AAA; Uvr DNA sequence : ATGGAAGCTAAATTTTCGCCCAGAGTAAAAGACGTGATTTCCTACAGTCGAGAAGAAGCTTTAAGATTGGGTCACGATTA TATTGGTACTGAACACTTGTTACTTGGATTGATCAGAGAAGGAGATGGTGTAGCGATAAAGATTTTAAAATCTTTGGGTG TTGATACTACAAAGCTTAGAAAAGCAGTAGAAGATGCTGTTAAAGGCACTTCTGGTATTACCGTTAATTTGGGTAATATT CCGTTGACTAAACAAGCCGAAAAAGTATTGAAGATAACCTATTTAGAAGCAAAAATCTTTAAAAGTGATGTGATAGGTAC AGAGCATTTATTGCTTTCTATCCTGCGAGAAGAAGATAATATTGCTTCGCAGATATTGGCGCAGTTCGATCTGAATTACG AAGTCATTAAATCTGAGGTTGAGTTGAATAAAGGAAATTTCAGAGATGAACCTTCCAACTCAACAGCTAGTGGTGATGAT GAGTATAGAGAGGAGGAATCTTTTTCTCAACCGAAGAAAGTTTCGGATATCAAATCCAAAACTCCGGTTTTAGATAATTT TGGTAGAGATTTAACCAAAATGGCTGAAGACGGTAAGTTAGACCCCATCGTTGGTCGCGAGAAGGAGATTGAAAGGGTTT CGCAGATCTTATCCCGCAGGAAAAAGAATAATCCAATTTTAATTGGAGAACCGGGAGTTGGTAAGTCTGCCATTGCAGAG GGATTGGCCTTGCGTATTGTTCAACGTAAAGTTTCCCGTGTGTTGTTTAACAAGCGTGTGGTAACTCTGGATCTTGCATC GCTGGTTGCCGGTACAAAATACCGTGGTCAGTTTGAAGAACGTATGAAGGCGGTAATGAACGAACTCGAGAAATCTCCGG ATGTGATTTTGTTTATCGATGAGATTCACACTATAGTTGGAGCAGGTGGAGCTTCTGGCTCTTTAGATGCATCAAATATG TTTAAACCGGCTTTGGCCAGGGGAGAAATACAATGTATAGGTGCAACCACTTTAGATGAATATCGTCAGTTTATCGAAAA GGACGGGGCTTTGGATCGCCGTTTCCAAAAGGTGATGATTGAGCCAGCAACACCTGATGAAACGGTTGAGATTTTAAACA GAATTAAAGATAAGTACGAAGAGCACCATGGAGTAAATTACACAGATGAAGCAATTCAGGCTTGTGTGAATTTGACAACT AGATACATTACAGACAGATTTTTACCGGATAAAGCGATAGATGCCTTAGACGAAGCTGGTTCTCGTGTGCATTTAACGAA CATTCATGTTCCTCAGAATATCATCGAAATCGAGCAGAAGATAGAAGATGTTAAGGTTGAGAAGAATAAGGTTGTTCGTA GCCAGAAATATGAGGAAGCTGCTAAACTTCGTGATACTGAGAAGAATCTTATCGAAGAATTAGAGAAAGCGAAATCTGAC TGGGAAGCGGAAACGAAATCTAAAAGATATACGGTAACTGAAGATAATGTGGCGGAGGTTGTTTCTATGATGACCGGTAT TCCGTTACAAAAAGTTGGACAAACAGATAGCCAAAAGTTATTGGGTATGTTTGACAAGATCAACGAGAAAATCATTGGTC AGGATGAGGCTATCAAGAAACTGAGTAAAGCTATCCAACGTACCAGAGCAGGTCTGAAAGATCCTAAGAAACCAATTGGT TCTTTCATATTCTTAGGTCCAACAGGTGTTGGTAAAACAGAATTGGCTAAGGAGCTTGCCCGTTTCATGTTCGATGCAGA TGACGCTTTGATTCAAATCGACATGAGCGAGTATATGGAGAAATTCGCGGTTTCAAGACTAGTTGGTGCGCCTCCAGGAT ATGTTGGTTATGAAGAAGGTGGACAATTAACTGAAAAAGTTAGAAGAAAGCCTTATGCAGTAGTCTTACTCGATGAGATT GAAAAAGCGCATCCGGATGTATTCAATATCCTATTGCAAGTGTTAGATGAAGGTCAGCTGACAGACTCGTTAGGCAGAAA AGTTGATTTTAGAAATACGATCATCATTATGACTTCTAATATTGGTGCAAGACAATTGAAAGAATTTGGCCAAGGTGTAG GTTTTGCTACTTCTGCAAGAACATCACAGGCTGAGGATCATAATAAAACAGTTATTGAAACTGCTTTGAAAAGAGCTTTT GCTCCAGAGTTTTTGAACAGGATAGATGATGTGATTGTATTTAATTCTTTGGAAAAAGAAGAAATCTTCAAAATTATCGA TATCGAACTGAAAGCGCTTTTCGGAAGAGTACAAGGTTTAGGTTACAAAGTTAATCTTACAGAAGCTGCTAAAGAATACA TTGCCGAGAAAGGTTTTGATTCCAGTTTTGGTGCCCGTCCATTGAAAAGAGCCATTCAGAAGTTCCTTGAAGATCCGATT GCTGAGGAGATTTTGAAAGGTGAACTGAACGAAGGTGATTCGATAGAAGTGGATTACGATAAAAGTAAAGATGAAATAAA GGTAAGTTCTAAAGCTGCTAAGAAGAATAAGAAAAAAGAAGAGGAAAAGGAAAGTGGCGAATAA Protein sequence : MEAKFSPRVKDVISYSREEALRLGHDYIGTEHLLLGLIREGDGVAIKILKSLGVDTTKLRKAVEDAVKGTSGITVNLGNI PLTKQAEKVLKITYLEAKIFKSDVIGTEHLLLSILREEDNIASQILAQFDLNYEVIKSEVELNKGNFRDEPSNSTASGDD EYREEESFSQPKKVSDIKSKTPVLDNFGRDLTKMAEDGKLDPIVGREKEIERVSQILSRRKKNNPILIGEPGVGKSAIAE GLALRIVQRKVSRVLFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSPDVILFIDEIHTIVGAGGASGSLDASNM FKPALARGEIQCIGATTLDEYRQFIEKDGALDRRFQKVMIEPATPDETVEILNRIKDKYEEHHGVNYTDEAIQACVNLTT RYITDRFLPDKAIDALDEAGSRVHLTNIHVPQNIIEIEQKIEDVKVEKNKVVRSQKYEEAAKLRDTEKNLIEELEKAKSD WEAETKSKRYTVTEDNVAEVVSMMTGIPLQKVGQTDSQKLLGMFDKINEKIIGQDEAIKKLSKAIQRTRAGLKDPKKPIG SFIFLGPTGVGKTELAKELARFMFDADDALIQIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTEKVRRKPYAVVLLDEI EKAHPDVFNILLQVLDEGQLTDSLGRKVDFRNTIIIMTSNIGARQLKEFGQGVGFATSARTSQAEDHNKTVIETALKRAF APEFLNRIDDVIVFNSLEKEEIFKIIDIELKALFGRVQGLGYKVNLTEAAKEYIAEKGFDSSFGARPLKRAIQKFLEDPI AEEILKGELNEGDSIEVDYDKSKDEIKVSSKAAKKNKKKEEEKESGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pedsa_1783 | YP_004274161.1 | ATPase AAA | VFG0079 | Protein | 0.0 | 52 |
| Pedsa_1783 | YP_004274161.1 | ATPase AAA | VFG0080 | Protein | 5e-144 | 47 |
