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Name : Pedsa_1581 (Pedsa_1581) Accession : YP_004273962.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Resistance Product : two component, sigma54 specific, transcriptional regulator, Fis family Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 1851815 - 1853230 bp Length : 1416 bp Strand : + Note : COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR 002078: IPR 002197: IPR 003593; KEGG: chu:CHU_1981 two-component response regulator, sigma-54 related; PFAM: sigma-54 factor in DNA sequence : TTGTTTATAAGCAATAATTCATTTGCCAACGTTTTTATTTTTAAATTTGCTGTTTTAAAAGTATTTGATGTGAGTAAAGT CTTAATAATTGACGACGAAGAAAAAATCAGAACCTTACTTTCCAAAATTATAAGTTTGGAGGGTTTTGACGTGGTGGAGG CTGGTGATATAAAAACCGGCTTAAAAAAACTGGAAATAGCTGATGTCGATGTCGTGATATGCGATGTAAAATTACCGGAT GGAAGTGGCGTTGAAGCGACCAAAGATATTAAAGACAAATATCCTGTAACAGAAATAATTTTGCTCACTGCTTATGGTAA TATTCCCGATGGCGTTCAGGCAATAAAGAACGGAGCATTTGATTACATTACCAAAGGTGATGACAATAACAAAATTATAC CCTTGCTCTACAAGGCAACCGAAAAAGTATCTTTAGCAAAAAGGGTATTACAATTAGAGAGACAGTTAGCCAATAAATAT TCATTTGATAACATCATTGGAAAATCCAAAATACTTAATGCTTCTATTGACGCAGCAAAAAAAGTGGCAGGTAGTGAAAC GACCGTTTTATTGACTGGAGAAACCGGAACGGGAAAAGAGGTATTTGCACAAGCAATTCACAATGCGAGCAACAGGAGCA AACAGAATTTTGTAGCAGTAAACTGCTCTGCTTTTAGCAAAGACTTGTTAGAAAATGAATTGTTTGGACATAAAGCCGGA GCATTTACAGGAGCAGTAAAAGACAGTAAAGGAATTTTTGAGGAAGCAAACCACGGGACGGTTTTCTTAGATGAAATTGG TGAAATGCCTTTAGATTTACAGGCAAAGCTGTTACGGGTTTTAGAAACAGGAGAATTTCTAAAAGTAGGTGATAGTAAAC CAACCAAGGTGAACGTCCGTATTATTGCTGCTACTAATAGAAATTTACAACAAGAAGTAGAGGAAGGACACTTCCGTGAA GATTTGTTTTACCGGATTGCCGTCTTTCAGATTTCACTACCCCCACTCAGAGAACGGGTTATTGATATAGAAGAACTGGC GATATTCTTTCTTCGCACATTTACAAATAAGACGAACAAAAAAATCAATAAGATTTCAAAAAACTATCTCGAAGCACTGA AACAACATTCGTGGAAAGGCAATATCAGAGAACTCAAAAACGTAATTGAGCGTAGCGTAATACTTACAGGTACTACAGAA TTAGAAGAAGATAGTCTGCCATTGGAATTACAACGTCTTGGCACTTTAGATAACCGTGAAAAAACACTATCTGCCTTTGA ACTTGCAAGCGTAGAAAAAGTTCATATTCAAAAAGTGTTGAACTACACTAATGGCAATAAAACAGAAACATCAAAACTGC TCAATATTGCCTTAACTACTTTATACAGGAAGATTGACGAGTACCATATAAAATAA Protein sequence : MFISNNSFANVFIFKFAVLKVFDVSKVLIIDDEEKIRTLLSKIISLEGFDVVEAGDIKTGLKKLEIADVDVVICDVKLPD GSGVEATKDIKDKYPVTEIILLTAYGNIPDGVQAIKNGAFDYITKGDDNNKIIPLLYKATEKVSLAKRVLQLERQLANKY SFDNIIGKSKILNASIDAAKKVAGSETTVLLTGETGTGKEVFAQAIHNASNRSKQNFVAVNCSAFSKDLLENELFGHKAG AFTGAVKDSKGIFEEANHGTVFLDEIGEMPLDLQAKLLRVLETGEFLKVGDSKPTKVNVRIIAATNRNLQQEVEEGHFRE DLFYRIAVFQISLPPLRERVIDIEELAIFFLRTFTNKTNKKINKISKNYLEALKQHSWKGNIRELKNVIERSVILTGTTE LEEDSLPLELQRLGTLDNREKTLSAFELASVEKVHIQKVLNYTNGNKTETSKLLNIALTTLYRKIDEYHIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 1e-47 | 41 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 1e-47 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pedsa_1581 | YP_004273962.1 | two component, sigma54 specific, transcriptional regulator, Fis family | BAC0089 | Protein | 3e-69 | 43 |
