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Name : Pedsa_1385 (Pedsa_1385) Accession : YP_004273773.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Unknown Product : hydroxymethylpyrimidine synthase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1634151 - 1636031 bp Length : 1881 bp Strand : - Note : COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: phe:Phep_2466 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: phosphomethylpyrimidine synthase; TIGRFAM: thiamine biosynthesis protein ThiC; PF DNA sequence : ATGGAAACAACAAAGAAGGATTTGGATTTGATATCAAGAGATCCATTTCCGGCATCAGAGAAAATCTATGTAAAAGGCAA AATACACAACGTCAATGTGGCTATGCGGAGGATTTCCTTAAGCGATACCAAGATTCATAACGGATTTGGCTTAACTGAAA AAAATGAAGCTGTAACAGTATATGACACAAGTGGACCCTATACGGATCCGAATATTCAGATTGATGTAAAGAAAGGGCTT CCACGACTTAGGGAGCAATGGGTTTTGGATAGGAAAGACGTAAATCGTTTAGATGATATCAGTTCTGATTATGGGAAACT ACGATTGAATGATGAAAAACTGGATCATTTACGTTTTGTGAGAAACGCCAATCCGTTAAAAGCCAAAACAGGCAATAACG TAACTCAATTACATTATGCCCGAAAAGGAATTATTACTCCGGAAATGGAATATATCGCTATCCGCGAAAACCAGCAGATA GAAATATTAAAAGATAGTTTGGGTGAGCGGTATGAAACCCTTGGGAAGCAGCATGAAGGAAATAGCTTTGGTGCATTAAC ACCAAAAGGCTTTATTACACCCGAATTTGTAAGACAAGAGGTTGCAGCAGGTCGGGCAGTAATTCCCGCAAATATCAATC ATCCGGAAGCAGAGCCTATGATTATAGGGCGCAATTTTTTGGTGAAAATCAACGCCAATATCGGAAATTCGGCGGTTACG TCTTCAATTGAAGAAGAAGTAGAAAAAGCAGTGTGGGCATGCCGATGGGGAGCGGATACAATTATGGATTTGTCTACCGG GAAAAATATCCATGAAACCCGTGAATGGATTATCAGGAATTCGCCAGTGCCTATTGGAACGGTTCCGATTTACCAGGCTC TGGAAAAAGTGAATGGTAAAGCTGAGGACTTGACCTGGGAAATATTCAGAGATACGCTGATTGAGCAGGCTGAGCAAGGC GTCGATTATTTTACCATCCATGCGGGAGTTTTGTTACGATATATTCCATTGACAGCTAAACGAATAACAGGTATTGTCTC AAGAGGAGGTTCTATTATGGCAAAGTGGTGCCTGGCGCATCATAAAGAGAATTTTCTGTACACAAATTTCGAGGAGATAT GCGAGATCATGAAAGCTTATGATGTTTCTTTCTCTCTGGGCGACGGGCTGAGACCCGGTTGTTTAGCTGATGCCAATGAT GCTGCACAATTTGCTGAACTGGAAACTTTGGGAGGGTTAACTAAAATTGCATGGGAACATGACGTTCAAACAATTATAGA AGGACCAGGGCATGTTCCTATGCACATGATTAAAGAGAATATGGAGAAGCAATTGCAATATTGTGAAGAAGCTCCTTTCT ATACTTTAGGGCCATTAACCACGGATATCGCCCCCGGTTATGATCATATCACTTCGGCAATAGGTGCAGCGATGATTGGA TGGTACGGAACTGCCATGTTGTGTTATGTGACTCCTAAAGAACATTTGGGGTTACCAAATAAAAAAGATGTTAAAGATGG GGTGATTACCTATAAGATAGCTGCACATGCCGCAGATCTGGCTAAGGGACATCCAGGAGCACAATATAGAGATAATGCCT TAAGTAAAGCTAGGTTTGAGTTTAGATGGGAAGATCAGTTTAACCTTTCTCTCGACCCCGACACAGCAAGGGAATTTCAC GATGAGACTTTACCTGCAGATGGAGCTAAAATTGCCCATTTCTGTTCTATGTGCGGCCCAAATTTCTGCTCAATGAAAAT AACACAGGATGTACGTACTTATGCAAAAGAGCAGGGGTTAGAAGACAACGAAGCCTTGGAAGCGGGAATGGCGGAGAAAT CGGAGCAGTTTAAAGACAAGGGAAGCGAAATCTATTTGTAG Protein sequence : METTKKDLDLISRDPFPASEKIYVKGKIHNVNVAMRRISLSDTKIHNGFGLTEKNEAVTVYDTSGPYTDPNIQIDVKKGL PRLREQWVLDRKDVNRLDDISSDYGKLRLNDEKLDHLRFVRNANPLKAKTGNNVTQLHYARKGIITPEMEYIAIRENQQI EILKDSLGERYETLGKQHEGNSFGALTPKGFITPEFVRQEVAAGRAVIPANINHPEAEPMIIGRNFLVKINANIGNSAVT SSIEEEVEKAVWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLTWEIFRDTLIEQAEQG VDYFTIHAGVLLRYIPLTAKRITGIVSRGGSIMAKWCLAHHKENFLYTNFEEICEIMKAYDVSFSLGDGLRPGCLADAND AAQFAELETLGGLTKIAWEHDVQTIIEGPGHVPMHMIKENMEKQLQYCEEAPFYTLGPLTTDIAPGYDHITSAIGAAMIG WYGTAMLCYVTPKEHLGLPNKKDVKDGVITYKIAAHAADLAKGHPGAQYRDNALSKARFEFRWEDQFNLSLDPDTAREFH DETLPADGAKIAHFCSMCGPNFCSMKITQDVRTYAKEQGLEDNEALEAGMAEKSEQFKDKGSEIYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 74 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 74 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 71 |
