Gene Information

Name : Pedsa_1154 (Pedsa_1154)
Accession : YP_004273545.1
Strain : Pedobacter saltans DSM 12145
Genome accession: NC_015177
Putative virulence/resistance : Unknown
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 1367630 - 1368742 bp
Length : 1113 bp
Strand : +
Note : COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: phe:Phep_1876 cystathionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: Cystathionine gamma-lyase; PFAM: Cys/Met metaboli

DNA sequence :
ATGAAAATTGAAACCATATCTATACATGCTGGAAATAAATTAGATGAAGATAGCCGGGCAGTTACACAACCCATTGTTTT
GTCCAGTACTTTCGAAAGAGGGAAAGACGGCGGCTACCCTTCTGGTTACATGTATAGCCGGATTGACAATCCGAACAGAA
AATCGTTAGAAAACGTTATTGCCAAATTGGAAAACGGTGCCGATTGTTGCGCATTCGCAACCGGGAACACGGCCGGGATG
TCGGTCTTCCAGTGTTTAGAACCCGGTAGTCATGTAATATGTCCTGATGACATGTACCATGGCTTAAGAAATCAACTGAA
ATTTGTTTTTAAAGGTATAATTGACCTTGATTTTGTCGACTTAACCCAGATAGATGAAATAGAAAAGTATGTAAAGGGCA
ATACGCGAATGATTTGGGTGGAAACTCCGTCCAATCCTTTATTGAAAATTGCAGATATTACAGCTATTGCTGTCATCGCA
AAAAAACATAACTTAAAACTGGTTGTAGACAATACCTTTGCTACACCATATGGGCAACAGCCTTTGGCTTTGGGTGCAGA
TTTGGTTATGCATTCGACCACCAAATTTCTAAATGGGCATTCTGATGTTTGTGGTGGCGCGGTAGTTAGCAAGGAAAAAG
ATGCCTTTTGGGAGAAAATGCGAAACTTACAGGTTTTAGGCGGCGCTGTACCTTCCCCTTTCGACTGTTATCTGGTTACC
AGAGGTATCAAAACGCTGGCATACAGAATGCGTGGGCATGAATATAATGCTTTTGAACTGGCAAAATACCTGGAAGCTCA
TCCTGCTATCGAACGCGTATTTTATCCGGGATTAAAATCTCATCCACAGTTCGATTTAGCCAGCAAACAAATGACCTCTT
TTGGCGGAATGCTATCGTTTTGTGTTAAAGCGGGTGAAGAAGCAGCCAGATCTCTGGTAAATAATGTGAAGATTTTTACG
CAGGCAACAAGTCTGGGTGGCGTAGAAAGCTTGCTTGAACATCGTTATTCTATTGAAGGTCCGGATTCTAAAACGCCTAA
AAACTTAATCAGAGCATCTGTAGGATTGGAAAACCTGGAAGACCTGATAGCCGATTTGGATAAAAATTTATAG

Protein sequence :
MKIETISIHAGNKLDEDSRAVTQPIVLSSTFERGKDGGYPSGYMYSRIDNPNRKSLENVIAKLENGADCCAFATGNTAGM
SVFQCLEPGSHVICPDDMYHGLRNQLKFVFKGIIDLDFVDLTQIDEIEKYVKGNTRMIWVETPSNPLLKIADITAIAVIA
KKHNLKLVVDNTFATPYGQQPLALGADLVMHSTTKFLNGHSDVCGGAVVSKEKDAFWEKMRNLQVLGGAVPSPFDCYLVT
RGIKTLAYRMRGHEYNAFELAKYLEAHPAIERVFYPGLKSHPQFDLASKQMTSFGGMLSFCVKAGEEAARSLVNNVKIFT
QATSLGGVESLLEHRYSIEGPDSKTPKNLIRASVGLENLEDLIADLDKNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-58 43
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-57 42