|
Name : Pedsa_1126 (Pedsa_1126) Accession : YP_004273517.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Unknown Product : S-adenosylmethionine--tRNA ribosyltransferase-isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 1339306 - 1340355 bp Length : 1050 bp Strand : + Note : COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); InterPro IPR003699; KEGG: phe:Phep_2572 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRN DNA sequence : ATGAAACTATCGCAGTTTAAATTCCATTTACCAGATTCTTTAATAGCACATTACCCTGCTGAAACACGTGACGAATCTCG TTTAATGGTTTTGCATAAAGATACTGGAGAAATCGAGCATAAACTATTCAAAGATGTTCTTGGTTATTTTGATGACAAGG ACGTGATGATTTTAAATAATACTAAGGTATTCCCTGCTCGTTTATACGGAAATAAGGAAAAAACTGGTGCTACAATTGAA GTTTTCTTATTAAGAGAATTAAATAAGGAATTGAGATTGTGGGATGTTTTAGTAGACCCTGCCAGAAAAATCAGAGTCGG AAATAAACTATATTTCGGCGATGACGATTTATTAGTTGCCGAAGTTGTTGACAATACTACTTCCAGAGGTAGAACCATCA GATTCTTATTTGATGGAACTGATGAAGAATTCCGCCAGAACATCGAAATCTTAGGTGAAACTCCACTTCCTAAATACATC AAACGTAAGCCAACGGCAGAAGACAAAGAGCGCTACCAAACTATCTTCGCTAAAAACGAAGGTGCCGTTGCTGCTCCTAC TGCAGGTTTACACTTTAGTAGAGAACTGATGAAAAGACTGGAGCTAAAAGGTGTTGAGTTTGCTGAAGTTACGCTACATG TTGGTTTGGGTACTTTCAGACAAGTGGAAGTTGAAGACTTGACTAAACACAAAATGGACTCTGAGCAATTCATCATTGCT GAAAAAGATGCCAATATTGTGAACAAAGCTATTGAAGAGAAAAGGAGAATCTGTGCTGTTGGAACTACAGTAATGAGAGC TGTAGAGTCTGCAGTTTCTGCAAGCCGTACTTTGAAACCGATGAACGACTGGACTTCCAAGTTTATCTTCCCTCCTTACG ATTTCAGTATCGCGAACAGCATGATCACTAATTTCCATACTCCTGAATCAACTTTATTGATGATGGTTTCGGCTTTTGGA GGATACGAACATGTAATGCATGCTTACGAAGTAGCAGTAAAAGAAAAATACAGATTTTATAGCTACGGAGATGCTATGTT GATTATATAA Protein sequence : MKLSQFKFHLPDSLIAHYPAETRDESRLMVLHKDTGEIEHKLFKDVLGYFDDKDVMILNNTKVFPARLYGNKEKTGATIE VFLLRELNKELRLWDVLVDPARKIRVGNKLYFGDDDLLVAEVVDNTTSRGRTIRFLFDGTDEEFRQNIEILGETPLPKYI KRKPTAEDKERYQTIFAKNEGAVAAPTAGLHFSRELMKRLELKGVEFAEVTLHVGLGTFRQVEVEDLTKHKMDSEQFIIA EKDANIVNKAIEEKRRICAVGTTVMRAVESAVSASRTLKPMNDWTSKFIFPPYDFSIANSMITNFHTPESTLLMMVSAFG GYEHVMHAYEVAVKEKYRFYSYGDAMLII |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 4e-57 | 42 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 3e-56 | 42 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 1e-56 | 42 |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 2e-59 | 42 |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 1e-58 | 42 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 1e-56 | 41 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 1e-56 | 41 |
