Gene Information

Name : Plabr_4250 (Plabr_4250)
Accession : YP_004271845.1
Strain : Planctomyces brasiliensis DSM 5305
Genome accession: NC_015174
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 5270211 - 5271023 bp
Length : 813 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: rba:RB11030 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: phosphonate-transporting ATPase; SMART: ATPase, AAA+ t

DNA sequence :
ATGATTTCGTCGGCCCCGCAGAATGCTTCGCTTTCGAGCGAAGCAGCATCCCTCATCCATACCACCGCACCTCTGGTCAT
TGAATCGGCCGTGAAGCAATACTCTCAAGGAGGTCGAACAGTCGCTGCTCTCGACCAGATCCATTTAAGGATCGAACCGG
GAGAGTTTGTGGCCATCATGGGGGCATCAGGCTCGGGCAAAAGCACATTGCTGCATGCAATTGCCGGCCTGATTGCGATT
GATTCCGGCCGGGTACTCATTGATGGACAGGATCTTTCCCACTTGTCCGATGCTCAGCTGACTCGTTTTCGTCGCGAACG
TGTCGGCCTGGTTTTTCAGGCTTTTAATCTGCTGCCAACACTCACAGCCGAAGCCAACATCCGTCTGCCCGCAGGGCGTG
TGAAGGACCTGGACAGCAAGGTAGAGAACCTGCTTGAGCGGCTGAATCTCATGTCCCGGAGATCGCACAAACCGGACGCC
ATGTCGGGAGGGGAGCAGCAGCGGACTGCCATCGCCAGGGCACTCGTTTGTGAGCCTGCGATTGTGCTGGCCGACGAACC
AACCGGAAGCCTCGATTCGGTAACCGGTCAGGAAATCTGTCAACTCCTGCGAGAACTCTGCAGCGAGCAGCAACGCACGA
TTGTGATCGTCACTCATGAGCCACAAGTTGCGATGTGGGCCGACCGGGTTGTTGTGTTGAAAGACGGAAAAACGCTGGCG
GAGTTCTCTCCTCAAAACCAACAAGACGCACAGGAAATTGCAGCCTTGTATCAACAGGCCTTGCTCGGGCGGAAGGATTC
TGGCGATGCGTGA

Protein sequence :
MISSAPQNASLSSEAASLIHTTAPLVIESAVKQYSQGGRTVAALDQIHLRIEPGEFVAIMGASGSGKSTLLHAIAGLIAI
DSGRVLIDGQDLSHLSDAQLTRFRRERVGLVFQAFNLLPTLTAEANIRLPAGRVKDLDSKVENLLERLNLMSRRSHKPDA
MSGGEQQRTAIARALVCEPAIVLADEPTGSLDSVTGQEICQLLRELCSEQQRTIVIVTHEPQVAMWADRVVVLKDGKTLA
EFSPQNQQDAQEIAALYQQALLGRKDSGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plabr_4250 YP_004271845.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 3e-41 48
Plabr_4250 YP_004271845.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 3e-34 45
Plabr_4250 YP_004271845.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 6e-42 44
Plabr_4250 YP_004271845.1 phosphonate-transporting ATPase NC_012469.1.7686946. Protein 5e-22 43
Plabr_4250 YP_004271845.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 1e-37 42
Plabr_4250 YP_004271845.1 phosphonate-transporting ATPase NC_012469.1.7685735. Protein 2e-31 41